BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0890.1
(391 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 100 1e-22
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 60 2e-09
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 100 bits (249), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 148/344 (43%), Gaps = 44/344 (12%)
Query: 65 ILIGDLNTTLNNQDKQGGSLASSSHIPRILEYINNL----NLLDVGFKGFPYTWNNKQFG 120
IL+GD + D S+ +S R LE N +L+D+ +G YTW+N Q
Sbjct: 222 ILVGDFDQIAATSDHY--SVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQ-D 278
Query: 121 ENFIQERLDRALANLPWFSK-NRRFSVKHLEAVGSDHLPILLTEDEDYHNKPKPFKFIHT 179
+N I +LDRA+AN WFS +V L V SDH P ++ + K F++
Sbjct: 279 DNPIIRKLDRAIANGDWFSSFPSAIAVFELSGV-SDHSPCIIILENLPKRSKKCFRYFSF 337
Query: 180 WMSHPDCHNFISKKWTNNKNIQVNLKNLSRQLTK-------WNKEVFGNIENNIKTIITK 232
+HP ++ W + ++ +L L N++ FGNI++ K +
Sbjct: 338 LSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDS 397
Query: 233 LNNA-----------------TNRSEYNNLSQKLEEMYRLQESLWKEKSRNNFLELGDKN 275
L + R ++N + LE YR +KSR +L+ GD N
Sbjct: 398 LESIQSQLLTNPSDSLFRVEHVARKKWNFFAAALESFYR-------QKSRIKWLQDGDAN 450
Query: 276 TKFFHSQAIQNNRSNKIRAIKNNQGEWCEELTDIHTIFTEHLLNINTSTVDF--PD--QK 331
T+FFH + N N I+ ++ + E +T + + + ++ S D PD Q+
Sbjct: 451 TRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQR 510
Query: 332 ILDLFTNTITQDQSRDLDRIPDQEEINRAINSLKKEAALGPDGY 375
I D+ + L +P +EI A+ ++ + A GPD +
Sbjct: 511 IKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSF 554
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 96/228 (42%), Gaps = 25/228 (10%)
Query: 61 NSPWILIGDLN--TTLNNQDKQGGSLASSSHIPRILEYINNLNLLDVGFKGFPYTWNNKQ 118
NSPW+++GD N ++ S S + + + + +L+D+ +G YTW+N Q
Sbjct: 119 NSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMRDSDLVDLPCRGVLYTWSNHQ 178
Query: 119 FGENFIQERLDRALANLPWFSKNRRFSVKHLEAVGSDHLP-ILLTEDEDYHNKPKPFKFI 177
+N I +LDRA+ N W + S SDH +++ + +K K FK+
Sbjct: 179 -QDNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAACMVILNNSPPLSKKKSFKYF 237
Query: 178 HTWMSHPDCHNFISKKWTNNKNIQVN---------LKNLSRQLTKWNKEVFGNIENNIKT 228
+HPD + I W K I V LK + N+ F NI+ + +
Sbjct: 238 SFLSTHPDFISSILAAW--QKEIAVGSFMFSLGELLKEAKKACRGLNRRGFSNIQAQLMS 295
Query: 229 IITKL---NNATNRSEYNNLSQKLEEMYRLQESLWKEKSRNNFLELGD 273
+ R +N + LE Y K+KSR +L+ GD
Sbjct: 296 NPSDFLFRAEHVARKNWNFFAAALESFY-------KQKSRIKWLKEGD 336