BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g1000.1
(239 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G03630.2 | suppressor SRP40-like protein | Chr2:1103205-11038... 79 1e-17
AT2G03630.1 | suppressor SRP40-like protein | Chr2:1103205-11042... 80 3e-17
AT1G74220.1 | homeobox-like protein | Chr1:27913099-27914134 REV... 74 2e-15
AT5G39200.1 | myb-like protein Q | Chr5:15694307-15695042 REVERS... 65 8e-13
AT3G02125.1 | pinin-like protein | Chr3:378205-379382 FORWARD LE... 50 9e-07
>AT2G03630.2 | suppressor SRP40-like protein | Chr2:1103205-1103863
FORWARD LENGTH=198 | 201606
Length = 198
Score = 78.6 bits (192), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 83 PEDQSFPLQVTDKEE--KPTPYRIPSKVFARTPSSKPVEWSVTSNESLFSIHMGNNSFSA 140
PE S P+QV D++ K P RIPS VF R+ S+ P EWS TSNESLFSIH+GNNSF+
Sbjct: 87 PEISSPPVQVMDRDNNGKYDPNRIPSSVFERSKSNVPAEWSCTSNESLFSIHLGNNSFTG 146
Query: 141 DQIFLMRSGEL 151
LM+SGEL
Sbjct: 147 YGGDLMKSGEL 157
>AT2G03630.1 | suppressor SRP40-like protein | Chr2:1103205-1104230
FORWARD LENGTH=310 | 201606
Length = 310
Score = 79.7 bits (195), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 83 PEDQSFPLQVTDKEE--KPTPYRIPSKVFARTPSSKPVEWSVTSNESLFSIHMGNNSFSA 140
PE S P+QV D++ K P RIPS VF R+ S+ P EWS TSNESLFSIH+GNNSF+
Sbjct: 87 PEISSPPVQVMDRDNNGKYDPNRIPSSVFERSKSNVPAEWSCTSNESLFSIHLGNNSFTG 146
Query: 141 DQIFLMRSGELGMPGD 156
LM+SGEL G+
Sbjct: 147 YGGDLMKSGELYKSGE 162
>AT1G74220.1 | homeobox-like protein | Chr1:27913099-27914134
REVERSE LENGTH=316 | 201606
Length = 316
Score = 74.3 bits (181), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 79/159 (49%), Gaps = 27/159 (16%)
Query: 102 YRIPSKVFARTPSSKPVEWSVTSNESLFSIHMGNNSFSADQIFLMRSGELGMP------- 154
YRIPS VFART S+ P EWS SNESLFSIHMGNNSF+ F +SGEL P
Sbjct: 88 YRIPSHVFARTTSTAP-EWSTISNESLFSIHMGNNSFTGGDYF--KSGELTFPQPPSPIT 144
Query: 155 GDYNNFLDSKLADSNNRLSTTSPRAGNENIGVDEAAAETMKEVIRATSEDKDKEKTPTEA 214
+ L S + N + + + + + AAET K RA+ ED+ K
Sbjct: 145 SPLPSPLPSTPHNVNQGGAVGAAAEVKTPVDIGKKAAETDK-AYRASKEDEQKAAASIRE 203
Query: 215 VCHSS--------------SVSRRSDESGTSVVSFAFPM 239
V ++ SVSRRS+ SV SFAFP+
Sbjct: 204 VIMANEAANNNNKTNKLDRSVSRRSE--NLSVKSFAFPV 240
>AT5G39200.1 | myb-like protein Q | Chr5:15694307-15695042 REVERSE
LENGTH=201 | 201606
Length = 201
Score = 65.5 bits (158), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 80/162 (49%), Gaps = 40/162 (24%)
Query: 94 DKEEKPT--PYRIPSKVFARTPSSKPVEWSVTSNESLFSIHMGNNSFSADQIFLMRSGEL 151
D+E KP P RIP VFA + + K EWS+ SNESLFSIHMG++SFS + +SGEL
Sbjct: 2 DQETKPGYEPDRIPHSVFATSVTPK-QEWSIQSNESLFSIHMGDHSFSK----MYKSGEL 56
Query: 152 G--------MPGDYNNFLDSKLA-------DSNNRLSTTSPRAGNENIGVDEAAAETMKE 196
YNN +D+K+A + N + T P+ GN + G+ ++
Sbjct: 57 TNFEYTASPYISYYNNNIDNKIAPTDAGTKEVNITMVETGPKTGNRD-GLTNVPKPDPRQ 115
Query: 197 VIRATSEDKDKEKTPTEAVCHSSSVSRRSDESGTSVVSFAFP 238
I +PT++ CHS + S S SFAFP
Sbjct: 116 QIPI---------SPTKS-CHSET-------SNNSTTSFAFP 140
>AT3G02125.1 | pinin-like protein | Chr3:378205-379382 FORWARD
LENGTH=355 | 201606
Length = 355
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 75/175 (42%), Gaps = 41/175 (23%)
Query: 101 PYRIPSKVFARTPSSKPVEWSVTSNESLFSIHMGNNSFSADQIFLMRSGEL--------- 151
P RIPS VF+ P + EWS+ SNESLFSIH GN S S +R E+
Sbjct: 91 PTRIPSSVFSSKPGNS-TEWSLASNESLFSIHDGNFSIST----ALRLAEIPRFEETVHV 145
Query: 152 ----------GMPGDYNNFLDSKLAD--------SNNRLSTTSPRAGNENIGVDEAAAET 193
N + +A+ SN+ + + D+ E
Sbjct: 146 ITEINSVPLPPPVKKPNEYEKETIAEKEPYQVENSNSDIEDNEEEEKMSEVESDDEHEEE 205
Query: 194 MKEVIRATS-EDKD-----KEKTPTEA---VCHSSSVSRRSDESGTSVVSFAFPM 239
++I A + +K+ KE P ++ V HS S+S RSD S S+ SFAFP+
Sbjct: 206 QTDMIEAEALVEKEVIETVKENKPEDSNSIVSHSPSISCRSDTSNNSIGSFAFPL 260