BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g1010.1
(109 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G02120.1 | hydroxyproline-rich glycoprotein family protein | ... 72 2e-17
>AT3G02120.1 | hydroxyproline-rich glycoprotein family protein |
Chr3:377122-377577 FORWARD LENGTH=126 | 201606
Length = 126
Score = 72.4 bits (176), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 36 EELLNTNIPDPLKVPQYSFKYPERYMSPTDLMMSPISKGILARTKKKPGVLLPPSNNPPK 95
E + P+ L+VP +FKYPERY SPTD MMSP++KG+LART+K G L+PPS N K
Sbjct: 52 EPMKKIGTPERLRVP-IAFKYPERYRSPTDAMMSPVTKGLLARTRKSSGSLIPPSFNQTK 110
Query: 96 ILEPYFQDVGLS 107
I E + GLS
Sbjct: 111 IQELRKPESGLS 122