BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g1050.1
(324 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G33040.1 | gamma subunit of Mt ATP synthase | Chr2:14018978-1... 514 0.0
AT1G15700.1 | ATPase%2C F1 complex%2C gamma subunit protein | Ch... 117 6e-30
AT4G04640.1 | ATPase%2C F1 complex%2C gamma subunit protein | Ch... 115 4e-29
>AT2G33040.1 | gamma subunit of Mt ATP synthase |
Chr2:14018978-14021047 REVERSE LENGTH=325 | 201606
Length = 325
Score = 514 bits (1323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 251/323 (77%), Positives = 284/323 (87%), Gaps = 3/323 (0%)
Query: 1 MAMAALRREGRRLAPLISPTTINTTARSSFIS-EELTPFGARSISTQIVRNRMKSVKNIQ 59
MAMA RREGRRL P I+ I RS S +E G RSISTQ+VRNRMKSVKNIQ
Sbjct: 1 MAMAVFRREGRRLLPSIAARPI-AAIRSPLSSDQEEGLLGVRSISTQVVRNRMKSVKNIQ 59
Query: 60 KITKAMKMVAASKLRAIQVRAENSRGFWQPFSALLGDTPVRVDVKKNIIVTISSDKGLCG 119
KITKAMKMVAASKLRA+Q RAENSRG WQPF+ALLGD P +DVKK+++VT+SSDKGLCG
Sbjct: 60 KITKAMKMVAASKLRAVQGRAENSRGLWQPFTALLGDNP-SIDVKKSVVVTLSSDKGLCG 118
Query: 120 GINSTAVKMSKGLHKLNSGPDKEIKYVVLGEKAKAQLVRDSKKDIEMSIAELQKNPLNYT 179
GINST VK+S+ L+KLN+GP+KE+++V++GEKAKA + RDSK DI +S+ EL KNPLNY
Sbjct: 119 GINSTVVKVSRALYKLNAGPEKEVQFVIVGEKAKAIMFRDSKNDIVLSVTELNKNPLNYA 178
Query: 180 QVSVLADDILKNVEYDALRIVFNKFQSVVSFLPTVATILSPEVIEKEAESGGTLGELDNY 239
QVSVLADDILKNVE+DALRIV+NKF SVV+FLPTV+T+LSPE+IEKE+E GG LGELD+Y
Sbjct: 179 QVSVLADDILKNVEFDALRIVYNKFHSVVAFLPTVSTVLSPEIIEKESEIGGKLGELDSY 238
Query: 240 EIEGGETKAEVLQNLAEFQFSCVLFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLT 299
EIEGGETK E+LQNLAEFQFSCV+FNAVLENACSE GARMSAMDSSSRNAGEMLDRLTLT
Sbjct: 239 EIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEMGARMSAMDSSSRNAGEMLDRLTLT 298
Query: 300 YNRTRQASITTELIEIISGASAL 322
YNRTRQASITTELIEIISGASAL
Sbjct: 299 YNRTRQASITTELIEIISGASAL 321
>AT1G15700.1 | ATPase%2C F1 complex%2C gamma subunit protein |
Chr1:5402629-5403789 REVERSE LENGTH=386 | 201606
Length = 386
Score = 117 bits (294), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 166/357 (46%), Gaps = 55/357 (15%)
Query: 12 RLAPLISPTTINTTARSSFISEELTPFGARSISTQIVRNRMKSVKNIQKITKAMKMVAAS 71
R P S T ++RS S ++ G R + R R+ SVKN QKIT+AM++VAA+
Sbjct: 36 RYYPFQSLTPNRISSRSPLPSIQIRA-GIREL-----RERIDSVKNTQKITEAMRLVAAA 89
Query: 72 KLRAIQVRAENSRGFWQPFSALLG-----------DTPVRV--DVKKNIIVTISSDKGLC 118
++R Q R F + +L D P+ + VK+ +V ++ DKGLC
Sbjct: 90 RVRRAQDAVIKGRPFTETLVEILYSINQSAQLEDIDFPLSIVRPVKRVALVVVTGDKGLC 149
Query: 119 GGINSTAVKMSKGLHKLNSGPDKEIKYVVL--GEKAKAQLVRDSKKDIEMSIAELQKNPL 176
GG N+ K K ++ + I VV+ G+K A R + D++ I P
Sbjct: 150 GGFNNAVTK--KATLRVQELKQRGIDCVVISVGKKGNAYFSRRDEFDVDKCIEGGGVFP- 206
Query: 177 NYTQVSVLADDILK---NVEYDALRIVFNKFQSVVSFLPTVATIL--------------S 219
+ V+ADD+ + E D + +V+ KF S+V P + T+L
Sbjct: 207 TTKEAQVIADDVFSLFVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGESCDVKGEC 266
Query: 220 PEVIEKE-----AESGGTLGELDNYEIEGGETK---------AEVLQNLAEFQFSCVLFN 265
+ IE E ++ G E E+E E ++L + + +
Sbjct: 267 VDAIEDEMFRLTSKDGKLAVERTKLEVEKPEISPLMQFEQDPVQILDAMMPLYLNSQILR 326
Query: 266 AVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 322
A+ E+ SE +RM+AM +++ NA E+ LT+ YNR RQA IT EL+EI++GA AL
Sbjct: 327 ALQESLASELASRMNAMSNATDNAVELKKNLTMAYNRARQAKITGELLEIVAGAEAL 383
>AT4G04640.1 | ATPase%2C F1 complex%2C gamma subunit protein |
Chr4:2350761-2351882 REVERSE LENGTH=373 | 201606
Length = 373
Score = 115 bits (288), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 153/319 (47%), Gaps = 48/319 (15%)
Query: 48 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVRAENSRGFWQPFSALLGD----------- 96
+R+R+ SVKN QKIT+AMK+VAA+K+R Q N R F + +L +
Sbjct: 56 LRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDDVD 115
Query: 97 ---TPVRVDVKKNIIVTISSDKGLCGGINSTAVKMSKGLHKLNSGPDKEIKYVVLGEKAK 153
T VR VKK +V ++ D+GLCGG N+ +K ++ K G E + +G+K
Sbjct: 116 VPLTKVR-PVKKVALVVVTGDRGLCGGFNNFIIKKAEARIKELKGLGLEYTVISVGKKGN 174
Query: 154 AQLVRDSKKDIEMSIAELQKNPLNYTQVSVLADDILK---NVEYDALRIVFNKFQSVVSF 210
+ +R ++ + E P + +ADD+ + E D + +++ KF S+V
Sbjct: 175 SYFLRRPYIPVDKYL-EAGTLP-TAKEAQAVADDVFSLFISEEVDKVELLYTKFVSLVKS 232
Query: 211 LPTVATI--LSP-----------------EVIEKEAESGGTLGELDNYE---------IE 242
P + T+ LSP E + G E + + ++
Sbjct: 233 EPVIHTLLPLSPKGEICDINGTCVDAAEDEFFRLTTKEGKLTVERETFRTPTADFSPILQ 292
Query: 243 GGETKAEVLQNLAEFQFSCVLFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNR 302
+ ++L L + + A+ E+ SE ARMSAM S+S NA ++ L++ YNR
Sbjct: 293 FEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSASDNASDLKKSLSMVYNR 352
Query: 303 TRQASITTELIEIISGASA 321
RQA IT E++EI++GA+A
Sbjct: 353 KRQAKITGEILEIVAGANA 371