BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g1110.1
(294 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G15530.1 | biotin carboxyl carrier protein 2 | Chr5:5038955-5... 209 1e-66
AT5G16390.1 | chloroplastic acetylcoenzyme A carboxylase 1 | Chr... 203 5e-64
AT5G16390.2 | chloroplastic acetylcoenzyme A carboxylase 1 | Chr... 166 4e-50
AT1G52670.1 | Single hybrid motif superfamily protein | Chr1:196... 63 3e-11
AT3G15690.2 | Single hybrid motif superfamily protein | Chr3:531... 61 1e-10
>AT5G15530.1 | biotin carboxyl carrier protein 2 |
Chr5:5038955-5040437 FORWARD LENGTH=255 | 201606
Length = 255
Score = 209 bits (531), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/270 (49%), Positives = 171/270 (63%), Gaps = 36/270 (13%)
Query: 1 MASFTIPCPK----SSSILALKGSPLQDPQLLHHSQISFPSRSSFATGSAFTSVSQAPKL 56
MAS ++PC K + + +L G Q Q + ISFPS VSQ
Sbjct: 1 MASLSVPCVKICALNRRVGSLPGISTQRWQP-QPNGISFPS-----------DVSQ---- 44
Query: 57 DHQSGWKVKAQVKDVVEEKS-LNSILVPETKAESDVSDTSSISAFMAQVSELVKLVDSRD 115
+H + W+++A +VV + + + KA+++V + + +S FMA+VS L+KLVDS+D
Sbjct: 45 NHSAFWRLRATTNEVVSNSTPMTNGGYMNGKAKTNVPEPAELSEFMAKVSGLLKLVDSKD 104
Query: 116 IMELQLKQLDCELVIRKKEALPQPPAAAPVIMMQHSSPPHPESYAPVSPPPTSKAA---- 171
I+EL+LKQLDCE+VIRKKEAL Q APV HS PP A S PP A
Sbjct: 105 IVELELKQLDCEIVIRKKEALQQAVPPAPVY---HSMPP---VMADFSMPPAQPVALPPS 158
Query: 172 -----APALPAPVKTNKSSHPPMKSPMAGTFYRSPAPGEPAFVKVGDQVKKGQVICIIEA 226
PA P SSHPP+KSPMAGTFYRSP PGEP FVKVGD+V+KGQ++CIIEA
Sbjct: 159 PTPTSTPATAKPTSAPSSSHPPLKSPMAGTFYRSPGPGEPPFVKVGDKVQKGQIVCIIEA 218
Query: 227 MKLMNEIEADQSGTIVEIVAEDGKPVSLDT 256
MKLMNEIEA++SGTI+E++AEDGKPVS+DT
Sbjct: 219 MKLMNEIEAEKSGTIMELLAEDGKPVSVDT 248
>AT5G16390.1 | chloroplastic acetylcoenzyme A carboxylase 1 |
Chr5:5361098-5363020 REVERSE LENGTH=280 | 201606
Length = 280
Score = 203 bits (516), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 133/243 (54%), Positives = 162/243 (66%), Gaps = 37/243 (15%)
Query: 33 ISFPSRSSF----------ATGSAFTSVSQAPKLDHQSGWKVKAQVKDVVEEKSLNSILV 82
+S PSRSS+ +TG++ S A K+D S + K K+ ++E S +S
Sbjct: 49 LSKPSRSSYPVVKAQSNKVSTGAS----SNAAKVDGPSSAEGKE--KNSLKESSASS--- 99
Query: 83 PETKAESDVSDTSSISAFMAQVSELVKLVDSRDIMELQLKQLDCELVIRKKEALPQPPAA 142
PE E SIS F+ QV+ LVKLVDSRDI+ELQLKQLDCELVIRKKEALPQP A
Sbjct: 100 PELATEE------SISEFLTQVTTLVKLVDSRDIVELQLKQLDCELVIRKKEALPQPQAP 153
Query: 143 APVIMMQHSSPPHPESYA---------PVSPPPTSKAAAPALPAPVKTNKSSHPPMKSPM 193
A +MMQ P+ SYA + P S A+ P+P KSS P +KSPM
Sbjct: 154 ASYVMMQQ---PNQPSYAQQMAPPAAPAAAAPAPSTPASLPPPSPPTPAKSSLPTVKSPM 210
Query: 194 AGTFYRSPAPGEPAFVKVGDQVKKGQVICIIEAMKLMNEIEADQSGTIVEIVAEDGKPVS 253
AGTFYRSPAPGEP F+KVGD+V+KGQV+CI+EAMKLMNEIE+D +GT+V+IVAEDGKPVS
Sbjct: 211 AGTFYRSPAPGEPPFIKVGDKVQKGQVLCIVEAMKLMNEIESDHTGTVVDIVAEDGKPVS 270
Query: 254 LDT 256
LDT
Sbjct: 271 LDT 273
>AT5G16390.2 | chloroplastic acetylcoenzyme A carboxylase 1 |
Chr5:5361554-5363020 REVERSE LENGTH=254 | 201606
Length = 254
Score = 166 bits (421), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 116/221 (52%), Positives = 141/221 (63%), Gaps = 37/221 (16%)
Query: 33 ISFPSRSSF----------ATGSAFTSVSQAPKLDHQSGWKVKAQVKDVVEEKSLNSILV 82
+S PSRSS+ +TG++ S A K+D S + K K+ ++E S +S
Sbjct: 49 LSKPSRSSYPVVKAQSNKVSTGAS----SNAAKVDGPSSAEGKE--KNSLKESSASS--- 99
Query: 83 PETKAESDVSDTSSISAFMAQVSELVKLVDSRDIMELQLKQLDCELVIRKKEALPQPPAA 142
PE E SIS F+ QV+ LVKLVDSRDI+ELQLKQLDCELVIRKKEALPQP A
Sbjct: 100 PELATEE------SISEFLTQVTTLVKLVDSRDIVELQLKQLDCELVIRKKEALPQPQAP 153
Query: 143 APVIMMQHSSPPHPESYA---------PVSPPPTSKAAAPALPAPVKTNKSSHPPMKSPM 193
A +MMQ P+ SYA + P S A+ P+P KSS P +KSPM
Sbjct: 154 ASYVMMQQ---PNQPSYAQQMAPPAAPAAAAPAPSTPASLPPPSPPTPAKSSLPTVKSPM 210
Query: 194 AGTFYRSPAPGEPAFVKVGDQVKKGQVICIIEAMKLMNEIE 234
AGTFYRSPAPGEP F+KVGD+V+KGQV+CI+EAMKLMNEIE
Sbjct: 211 AGTFYRSPAPGEPPFIKVGDKVQKGQVLCIVEAMKLMNEIE 251
>AT1G52670.1 | Single hybrid motif superfamily protein |
Chr1:19615119-19617420 REVERSE LENGTH=274 | 201606
Length = 274
Score = 63.2 bits (152), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 37/216 (17%)
Query: 66 AQVKDVVEEKS--LNSILVPETKAESDVSDTSSISAFMAQVSELVKLVDSRDIMELQLKQ 123
A VKD E KS +N+ L+P++ S + A +++++ DS I E +LK
Sbjct: 70 ADVKDSDETKSTVVNTHLMPKS---------SEVEALISEIT------DSSSIAEFELKL 114
Query: 124 LDCELVIRKK---EALPQPPAAAPVIMMQ------HSSPPHPESYAPVSPPPTSKAAAPA 174
L + +K E+ P P PV+ H++ S ++ +S A P
Sbjct: 115 GGFRLYVARKLTDESSPPPQQIQPVVAASATPEGVHTNGSATSSSLAITKTSSSSADRPQ 174
Query: 175 LPAPVKTNKSSHPPM---KSPMAGTFYRSP---APGEPAFVKVGDQVKKGQVICIIEAMK 228
A NK++ + +SP G F RS P K D VK+GQV+C IE +
Sbjct: 175 TLA----NKAADQGLVILQSPTVGYFRRSKTIKGKRTPTICKEKDIVKEGQVLCYIEQLG 230
Query: 229 LMNEIEADQSGTIVEIVAEDGKPVSL-DTVPSQIPS 263
+E+D SG IV+I+ EDG+PV D + + +PS
Sbjct: 231 GQIPVESDVSGEIVKILREDGEPVGYNDALITVLPS 266
>AT3G15690.2 | Single hybrid motif superfamily protein |
Chr3:5317108-5319435 FORWARD LENGTH=263 | 201606
Length = 263
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 97/198 (48%), Gaps = 25/198 (12%)
Query: 84 ETKAESDVSDTSSI--SAFMAQV----SELVKLV----DSRDIMELQLKQLDCELVIRKK 133
ET A +V D+ I S AQ+ SE+ LV DS I E +LK L + +
Sbjct: 65 ETSATIEVKDSKEIKSSRLNAQLVPKPSEVEALVTEICDSSSIAEFELKLGGFRLYVARN 124
Query: 134 EA----LPQPPAAAPVIMMQHSSPPHPESYAPVSPPPTSKAAAPALPAPVKTNKSSHPPM 189
A L PP P + +++ PES S S + A + PA ++ +
Sbjct: 125 IADNSSLQPPPT--PAVTASNATTESPESNGSAS----STSLAISKPASSAADQGLMI-L 177
Query: 190 KSPMAGTFYRSPA-PGE--PAFVKVGDQVKKGQVICIIEAMKLMNEIEADQSGTIVEIVA 246
+SP G F RS G+ P+ K DQVK+GQ++C IE + IE+D +G +V+I+
Sbjct: 178 QSPKVGFFRRSKTIKGKRLPSSCKEKDQVKEGQILCYIEQLGGQFPIESDVTGEVVKILR 237
Query: 247 EDGKPVSL-DTVPSQIPS 263
EDG+PV D + S +PS
Sbjct: 238 EDGEPVGYNDALISILPS 255