BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g1180.1
(391 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G68070.1 | Zinc finger%2C C3HC4 type (RING finger) family pro... 429 e-150
AT2G01735.1 | RING-finger protein for embryogenesi | Chr2:324499... 387 e-134
AT3G61180.1 | RING/U-box superfamily protein | Chr3:22645680-226... 325 e-109
AT4G11680.1 | Zinc finger%2C C3HC4 type (RING finger) family pro... 304 e-100
AT1G12760.2 | Zinc finger%2C C3HC4 type (RING finger) family pro... 286 1e-94
>AT1G68070.1 | Zinc finger%2C C3HC4 type (RING finger) family
protein | Chr1:25515412-25516767 REVERSE LENGTH=343 |
201606
Length = 343
Score = 429 bits (1104), Expect = e-150, Method: Compositional matrix adjust.
Identities = 208/331 (62%), Positives = 255/331 (77%), Gaps = 13/331 (3%)
Query: 12 TTQPLISSRQTNNGDSSPTTSR-LSLLLGRASGRHGASNLVRETAAMQLEERRADWGYSK 70
++ PL+ SRQ SSP +++LL RASGR GAS +VRETAA +LEERRADWGYSK
Sbjct: 12 SSTPLLRSRQ-----SSPRRQPVIAVLLNRASGRRGASMVVRETAAQELEERRADWGYSK 66
Query: 71 PVVTLDIMWNLAFAIVSVVMIGSTLTERPNTPIRVWILGYAFQCIIHVIMVWSEYRRRRM 130
PVV LD++WN AF +V++VM+ E+PN PIR+WI GYA QC++HV++VW E+R+R
Sbjct: 67 PVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFRKRN- 125
Query: 131 GRNRSIDDGTRNSDSDTNDSEDESGNSSGNRSSIAKRCESLNTMASFVWWIVGFYWVVSG 190
R+R D + + DSEDE + R K CES+NT+ SFVWWIVGFYW+VSG
Sbjct: 126 ARSRPGD--LEAAQATNQDSEDEDNDE---RFLSTKTCESMNTIISFVWWIVGFYWLVSG 180
Query: 191 GEILLQNAPRLYWVAVVFLAFDVFFAIFCVALACVIGIALCCCLPCIIAILYAVAGQEGA 250
G+ILLQNA LYW+ VFLAFDVFFAIFCV LAC+IGIALCCCLPCIIA+LYAVAGQEGA
Sbjct: 181 GDILLQNATHLYWLTFVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIALLYAVAGQEGA 240
Query: 251 SEADLSMLARYRFQISSYEEKASS-GGKMVPLATSGEELTEERVLLPEDAECCICLTSYD 309
SEADLS+L +YRF + +EK S GGKM+P+ + E L ERVLLPEDA+CCICL+SY+
Sbjct: 241 SEADLSILPKYRFHTMNNDEKQSDGGGKMIPVDAASENLGNERVLLPEDADCCICLSSYE 300
Query: 310 DGVELNELPCNHHFHATCIMKWLKINASCPL 340
DG EL LPCNHHFH+TCI+KWLK+NA+CPL
Sbjct: 301 DGAELVSLPCNHHFHSTCIVKWLKMNATCPL 331
>AT2G01735.1 | RING-finger protein for embryogenesi |
Chr2:324499-325895 FORWARD LENGTH=359 | 201606
Length = 359
Score = 387 bits (995), Expect = e-134, Method: Compositional matrix adjust.
Identities = 185/330 (56%), Positives = 234/330 (70%), Gaps = 4/330 (1%)
Query: 15 PLISSRQTNNGDSSPTTSR---LSLLLGRASGRHGASNLVRETAAMQLEERRADWGYSKP 71
PL+ R + SS +++R L++LLGR +G S LVRETAA LEERR DWGYSKP
Sbjct: 17 PLLRPRHDGSFSSSSSSARPTALAVLLGRITGHRAPSMLVRETAARALEERRIDWGYSKP 76
Query: 72 VVTLDIMWNLAFAIVSVVMIGSTLTERPNTPIRVWILGYAFQCIIHVIMVWSEYRRRRMG 131
VV DI+WN A + S VM+ T+ ERPN PIRVWI Y QC+ HV++VWSEY RR
Sbjct: 77 VVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWRRNST 136
Query: 132 RNRSIDDGTRNSDSDTNDSEDESGNSSGNRSSIAKRCESLNTMASFVWWIVGFYWVVSGG 191
R + + D + ++ + + S KRCES+NT+ SF+WWI+GFYWVV GG
Sbjct: 137 RRARDLESYDHEDYNIEYDYEQDSDDNSTTYSFVKRCESINTVISFIWWIIGFYWVVEGG 196
Query: 192 EILLQNAPRLYWVAVVFLAFDVFFAIFCVALACVIGIALCCCLPCIIAILYAVAGQEGAS 251
+ LL AP LYW++V+FLA DVFFA+FCV LAC++GIALCCCLPCIIA+LYAVAG EG S
Sbjct: 197 DKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIALLYAVAGTEGVS 256
Query: 252 EADLSMLARYRFQISSYEEKASSG-GKMVPLATSGEELTEERVLLPEDAECCICLTSYDD 310
EA+L +L Y+F+ EK +G GKMVP+ +G L ER LL EDA+CCICL+SY+D
Sbjct: 257 EAELGVLPLYKFKAFHSNEKNITGPGKMVPIPINGLCLATERTLLAEDADCCICLSSYED 316
Query: 311 GVELNELPCNHHFHATCIMKWLKINASCPL 340
G EL+ LPCNHHFH+TCI+KWLK+ A+CPL
Sbjct: 317 GAELHALPCNHHFHSTCIVKWLKMRATCPL 346
>AT3G61180.1 | RING/U-box superfamily protein |
Chr3:22645680-22647290 FORWARD LENGTH=379 | 201606
Length = 379
Score = 325 bits (834), Expect = e-109, Method: Compositional matrix adjust.
Identities = 163/329 (49%), Positives = 211/329 (64%), Gaps = 20/329 (6%)
Query: 29 PTTSRLSLLLGRASGRH----GASNLVRETAAMQLEERRADWGYSKPVVTLDIMWNLAFA 84
P S LL RAS R S VRE AA QLEER++ W YSKP++ LDI+WN F
Sbjct: 37 PIRGAASRLLRRASNRRMMLREPSVRVREVAAEQLEERQSQWAYSKPIIVLDILWNFLFV 96
Query: 85 IVSVVMIGSTLTERPNTPIRVWILGYAFQCIIHVIMVWSEYRRRRMGRNRSIDDGTRNSD 144
IVS+ ++G + E P+ P+R+WI+GY QC+ HV V +EY+RRR+ + ++
Sbjct: 97 IVSIAILGFSSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYKRRRVANSPPPSGEDSSNH 156
Query: 145 SDTNDSEDESGNSSGNRS-------SIAKRCESLNTMASFVWWIVGFYWVVSGGEILLQN 197
+ SEDES S N + S K ES NTM SFVWWI+GFYWV + E L Q+
Sbjct: 157 ESLSGSEDESDGYSINNTDDDDHGTSFTKHLESANTMFSFVWWIIGFYWVTADTEALAQS 216
Query: 198 APRLYWVAVVFLAFDVFFAIFCVALACVIGIALCCCLPCIIAILYAVAGQEGASEADLSM 257
+P+LYW+ V FLAFDV F + CVA+A +IGIA+CCCLPCIIAILYA+A QEGA + ++
Sbjct: 217 SPQLYWLCVAFLAFDVMFVVICVAVASLIGIAVCCCLPCIIAILYALADQEGAPDEEIER 276
Query: 258 LARYRFQISSYEEKA------SSGGKMVPLATSGEELTEERVLLPEDAECCICLTSYDDG 311
L +++F EK + GG M L T + ER+LL EDAEC ICL +Y+DG
Sbjct: 277 LLKFKFLTVKNSEKVNGEIRETQGGIMTGLDTESQ---TERMLLSEDAECSICLCAYEDG 333
Query: 312 VELNELPCNHHFHATCIMKWLKINASCPL 340
VEL ELPC HHFH+ C+ KWL+INA+CPL
Sbjct: 334 VELRELPCRHHFHSLCVDKWLRINATCPL 362
>AT4G11680.1 | Zinc finger%2C C3HC4 type (RING finger) family
protein | Chr4:7053737-7055516 REVERSE LENGTH=390 |
201606
Length = 390
Score = 304 bits (779), Expect = e-100, Method: Compositional matrix adjust.
Identities = 162/294 (55%), Positives = 207/294 (70%), Gaps = 2/294 (0%)
Query: 48 SNLVRETAAMQLEERRADWGYSKPVVTLDIMWNLAFAIVSVVMIGSTLTERPNTPIRVWI 107
S LVRETAA QLEER++DW YSKPVV LDI+WNLAF + V ++ + E+PN P+RVW+
Sbjct: 85 SMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWV 144
Query: 108 LGYAFQCIIHVIMVWSEYRRRRMGRNRSIDDGTRNSDSDTNDSEDESG-NSSGNRSSIAK 166
+GY QC +H+ V EYRRRR R+ G+ ++S + + G S+ AK
Sbjct: 145 VGYGIQCWLHMACVCVEYRRRRRRRHPEDGGGSGLTNSSSQQYVSLAQLEDRGETSNPAK 204
Query: 167 RCESLNTMASFVWWIVGFYWVVSGGEILLQNAPRLYWVAVVFLAFDVFFAIFCVALACVI 226
ES NTM SF+WWI+GFYWV +GG+ L ++P+LYW+ ++FL FDVFF +FCVALACVI
Sbjct: 205 HLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVI 264
Query: 227 GIALCCCLPCIIAILYAVAGQEGASEADLSMLARYRFQISSYEEKASSGGKMVPLATSGE 286
G+A+CCCLPCIIAILYAVA QEGAS+ D+ + ++RF + EK S + + + G
Sbjct: 265 GLAVCCCLPCIIAILYAVADQEGASKNDIDQMPKFRFTKTGNVEKLSGKARGI-MTECGT 323
Query: 287 ELTEERVLLPEDAECCICLTSYDDGVELNELPCNHHFHATCIMKWLKINASCPL 340
+ ER L PEDAECCICL Y+DGVEL ELPCNHHFH TCI KWL IN+ CPL
Sbjct: 324 DSPIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPL 377
>AT1G12760.2 | Zinc finger%2C C3HC4 type (RING finger) family
protein | Chr1:4348941-4350512 FORWARD LENGTH=337 |
201606
Length = 337
Score = 286 bits (733), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 157/317 (49%), Positives = 207/317 (65%), Gaps = 24/317 (7%)
Query: 48 SNLVRETAAMQLEERRADWGYSKPVVTLDIMWNLAFAIVSVVMIGSTLTERPNTPIRVWI 107
S LVRE AA QLEER++DW YSKPVV LDI+WNLAF V+ ++ + E P P+RVW+
Sbjct: 5 SMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWL 64
Query: 108 LGYAFQCIIHVIMVWSEYRRRRMGRNRS--------------------IDDGTRNSDSDT 147
LGYA QC++H++ V EYRRR R +++ S ++
Sbjct: 65 LGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNS 124
Query: 148 NDSEDESGNSSGNRSSIAKRCESLNTMASFVWWIVGFYWVVSGGEILLQNAPRLYWVAVV 207
+ G+ SS+AK ES NTM SF+WWI+GFYWV +GG+ L Q +PR+YW+++V
Sbjct: 125 GVQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIV 184
Query: 208 FLAFDVFFAIFCVALACVIGIALCCCLPCIIAILYAVAGQEGASEADLSMLARYRFQ--- 264
FL FDVFF +FCVALACVIGIA+CCCLPCIIA+LYAVA QEGAS+ D+ L +++F+
Sbjct: 185 FLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRKLG 244
Query: 265 -ISSYEEKASSGGKMVPLATSGEELTEERVLLPEDAECCICLTSYDDGVELNELPCNHHF 323
+ + + G + G + E LL EDAECCICL++Y+DG EL ELPC HHF
Sbjct: 245 DANKHTNDEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHF 304
Query: 324 HATCIMKWLKINASCPL 340
H +C+ KWL INA+CPL
Sbjct: 305 HCSCVDKWLYINATCPL 321