BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g1260.1
(596 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G51172.1 | hypothetical protein | Chr1:18963205-18965571 FORW... 52 1e-06
AT4G03830.1 | hypothetical protein (Protein of unknown function%... 48 2e-05
>AT1G51172.1 | hypothetical protein | Chr1:18963205-18965571 FORWARD
LENGTH=681 | 201606
Length = 681
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 247 LRMRYQIPATLKMRAPEPGETVVESRRPGYYALYENFL-EAGIRFPISCLVRDVLVRFGI 305
LR +QIP +K+ +P +T ES PG+ +E F E G+ FP+ ++ D++ FGI
Sbjct: 33 LRGAHQIPHQIKLISPG-TKTSPESPPPGHTCAFEIFFSECGLFFPLPDILIDLMHEFGI 91
Query: 306 TPTQLMPNAWRLLMALEKLGENLNEPLTAQDVTAHYFMK 344
QL PN R ++ L L E L D Y +K
Sbjct: 92 ALPQLCPNVIRTVLCLLTLAEEDGFRLALSDFLQLYAVK 130
>AT4G03830.1 | hypothetical protein (Protein of unknown function%2C
DUF601) | Chr4:1790440-1792458 FORWARD LENGTH=578 |
201606
Length = 578
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 247 LRMRYQIPATLKMRAPEPGETVVESRRPGYYALYENFL-EAGIRFPISCLVRDVLVRFGI 305
L+ + IP + + +PE ++ E+ PG+ +E F E G+ FP+ ++ D + FGI
Sbjct: 33 LKGAHGIPGRINLISPEATDSP-ETPSPGHACAFEIFFSECGLYFPLPDILIDFMHEFGI 91
Query: 306 TPTQLMPNAWRLLMALEKLGENLN 329
QL PN R +++L L E N
Sbjct: 92 ALPQLCPNVIRTILSLLTLAEEDN 115