BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g1270.1
(656 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G33406.1 | hAT dimerization domain-containing protein / trans... 84 1e-16
AT1G79740.3 | hAT transposon superfamily | Chr1:30004367-3000622... 57 3e-08
AT1G79740.2 | hAT transposon superfamily | Chr1:30004367-3000622... 57 3e-08
AT1G79740.4 | hAT transposon superfamily | Chr1:30004367-3000671... 57 3e-08
AT1G79740.1 | hAT transposon superfamily | Chr1:30004367-3000671... 57 3e-08
>AT5G33406.1 | hAT dimerization domain-containing protein /
transposase-like protein | Chr5:12676126-12678403
REVERSE LENGTH=509 | 201606
Length = 509
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 14/125 (11%)
Query: 467 NSWGLDVVELQKFAVRVLGLTCAASPCERNWSAFDHLHTKKRNKLDHQKLNDLVFVQYNN 526
+++G LQ FA++VL LTC+A+ CERNW F LHTK+RN+L +LND++FV+YN
Sbjct: 219 SAYGSSTPNLQNFAIKVLSLTCSATGCERNWGVFQLLHTKRRNRLTQCRLNDMIFVKYNR 278
Query: 527 KLKARFLDRTSPGGRDLDLIILKNAD-LDEWI---VPFNAA----DEFVV-GTDITYGLV 577
L+ R+ + D I+L D +EW+ + N++ D+ V D+T+ V
Sbjct: 279 ALQRRYKRNDT-----FDPILLNEIDQCNEWLTGRMEENSSDTENDDLVFENDDLTWAEV 333
Query: 578 EEAEG 582
EA G
Sbjct: 334 GEAAG 338
>AT1G79740.3 | hAT transposon superfamily | Chr1:30004367-30006229
REVERSE LENGTH=518 | 201606
Length = 518
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 476 LQKFAVRVLGLTCAASPCERNWSAFDHLHTKKRNKLDHQKLNDLVFVQYNNKLKARFLDR 535
LQ+ A+R+L C+ ER WS F +H ++RNK+D + LN L +V N KL
Sbjct: 399 LQRVAIRILSQVCSGYNLERQWSTFQQMHWERRNKIDREILNKLAYVNQNLKLGRMITLE 458
Query: 536 TSPGG-RDLDLIILKNADLDEWI 557
T P D+D+ + EW+
Sbjct: 459 TDPIALEDIDM-------MSEWV 474
>AT1G79740.2 | hAT transposon superfamily | Chr1:30004367-30006229
REVERSE LENGTH=518 | 201606
Length = 518
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 476 LQKFAVRVLGLTCAASPCERNWSAFDHLHTKKRNKLDHQKLNDLVFVQYNNKLKARFLDR 535
LQ+ A+R+L C+ ER WS F +H ++RNK+D + LN L +V N KL
Sbjct: 399 LQRVAIRILSQVCSGYNLERQWSTFQQMHWERRNKIDREILNKLAYVNQNLKLGRMITLE 458
Query: 536 TSPGG-RDLDLIILKNADLDEWI 557
T P D+D+ + EW+
Sbjct: 459 TDPIALEDIDM-------MSEWV 474
>AT1G79740.4 | hAT transposon superfamily | Chr1:30004367-30006715
REVERSE LENGTH=651 | 201606
Length = 651
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 476 LQKFAVRVLGLTCAASPCERNWSAFDHLHTKKRNKLDHQKLNDLVFVQYNNKLKARFLDR 535
LQ+ A+R+L C+ ER WS F +H ++RNK+D + LN L +V N KL
Sbjct: 532 LQRVAIRILSQVCSGYNLERQWSTFQQMHWERRNKIDREILNKLAYVNQNLKLGRMITLE 591
Query: 536 TSPGG-RDLDLIILKNADLDEWI 557
T P D+D+ + EW+
Sbjct: 592 TDPIALEDIDM-------MSEWV 607
>AT1G79740.1 | hAT transposon superfamily | Chr1:30004367-30006715
REVERSE LENGTH=651 | 201606
Length = 651
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 476 LQKFAVRVLGLTCAASPCERNWSAFDHLHTKKRNKLDHQKLNDLVFVQYNNKLKARFLDR 535
LQ+ A+R+L C+ ER WS F +H ++RNK+D + LN L +V N KL
Sbjct: 532 LQRVAIRILSQVCSGYNLERQWSTFQQMHWERRNKIDREILNKLAYVNQNLKLGRMITLE 591
Query: 536 TSPGG-RDLDLIILKNADLDEWI 557
T P D+D+ + EW+
Sbjct: 592 TDPIALEDIDM-------MSEWV 607