BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g1340.1
(129 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G35695.1 | nuclease HARBI1-like protein | Chr5:13869120-13869... 59 2e-11
AT5G41980.1 | nuclease | Chr5:16793765-16794889 FORWARD LENGTH=3... 48 3e-07
>AT5G35695.1 | nuclease HARBI1-like protein | Chr5:13869120-13869941
FORWARD LENGTH=211 | 201606
Length = 211
Score = 58.9 bits (141), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 3 GEKDIPTTAAEFFNMKHSSARNVIERCFRLLKLIRWDILESPPFYPVKTHNRIIMACCLL 62
G++ P T E FN++H S RNVIER F + K R+ I +S P + K +++ C L
Sbjct: 78 GQRRDPETPHELFNLRHVSLRNVIERIFGIFK-SRFAIFKSAPPFSYKKQAGLVLTCAAL 136
Query: 63 HNLIRQEMSAD 73
HN +R+E +D
Sbjct: 137 HNFLRKECRSD 147
>AT5G41980.1 | nuclease | Chr5:16793765-16794889 FORWARD LENGTH=374
| 201606
Length = 374
Score = 48.1 bits (113), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 11 AAEFFNMKHSSARNVIERCFRLLKLIRWDILESPPFYPVKTHNRIIMACCLLHNLIRQEM 70
A E FN +H I R F LK R+ IL S P YP++T ++++A C LHN +R E
Sbjct: 247 AKEMFNERHKLLHRAIHRTFGALKE-RFPILLSAPPYPLQTQVKLVIAACALHNYVRLEK 305
Query: 71 SAD 73
D
Sbjct: 306 PDD 308