BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g1390.1
(429 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G17230.4 | PHYTOENE SYNTHASE | Chr5:5659839-5662087 REVERSE L... 604 0.0
AT5G17230.2 | PHYTOENE SYNTHASE | Chr5:5659839-5662087 REVERSE L... 604 0.0
AT5G17230.1 | PHYTOENE SYNTHASE | Chr5:5659839-5662087 REVERSE L... 604 0.0
AT5G17230.3 | PHYTOENE SYNTHASE | Chr5:5659839-5662087 REVERSE L... 596 0.0
>AT5G17230.4 | PHYTOENE SYNTHASE | Chr5:5659839-5662087 REVERSE
LENGTH=422 | 201606
Length = 422
Score = 604 bits (1557), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 289/350 (82%), Positives = 328/350 (93%), Gaps = 5/350 (1%)
Query: 76 IISSSITSS-TGELTVSSSEQRVNDVVLKQAALVKEHLRSNR-DLDVKP--DIIVPGTLS 131
++SSS+ +S +GE+ +SS E++V +VVLKQAALV + LRS+ DLDVK D+++PG+LS
Sbjct: 68 VVSSSLVASPSGEIALSS-EEKVYNVVLKQAALVNKQLRSSSYDLDVKKPQDVVLPGSLS 126
Query: 132 LLNEAYDRCREVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPR 191
LL EAYDRC EVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP
Sbjct: 127 LLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPM 186
Query: 192 ALDRWESRLEDLFQGRPYDMLDAALSDTVSKFPVDIQPFRDMIEGMRMDLRKSRYKNFDE 251
ALDRWE+RLEDLF+GRP+DMLDAAL+DTV+++PVDIQPFRDMIEGMRMDL+KSRY+NFD+
Sbjct: 187 ALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNFDD 246
Query: 252 LYLYCYYVAGTVGLMSVPVMGIEPQSQATTESIYSAALSLGIANQLTNILRDVGEDARRG 311
LYLYCYYVAGTVGLMSVPVMGI+P+S+ATTES+Y+AAL+LGIANQLTNILRDVGEDARRG
Sbjct: 247 LYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGEDARRG 306
Query: 312 RVYLPQDELAQEGLSDEDIFAGKVTDKWRNFMKKQIKRARLFFDEAEKGVTQLSSASRWP 371
RVYLPQDELAQ GLSDEDIFAGKVTDKWRNFMK Q+KRAR+FFDEAEKGVT+LS+ASRWP
Sbjct: 307 RVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAASRWP 366
Query: 372 VWASLLLYRQILDEIEANDYNNFTKRAYVSKSKKIAALPIAYARSVFGVS 421
VWASLLLYR+ILDEIEANDYNNFTKRAYV K KKIAALP+AYA+SV S
Sbjct: 367 VWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKSVLKTS 416
>AT5G17230.2 | PHYTOENE SYNTHASE | Chr5:5659839-5662087 REVERSE
LENGTH=422 | 201606
Length = 422
Score = 604 bits (1557), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 289/350 (82%), Positives = 328/350 (93%), Gaps = 5/350 (1%)
Query: 76 IISSSITSS-TGELTVSSSEQRVNDVVLKQAALVKEHLRSNR-DLDVKP--DIIVPGTLS 131
++SSS+ +S +GE+ +SS E++V +VVLKQAALV + LRS+ DLDVK D+++PG+LS
Sbjct: 68 VVSSSLVASPSGEIALSS-EEKVYNVVLKQAALVNKQLRSSSYDLDVKKPQDVVLPGSLS 126
Query: 132 LLNEAYDRCREVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPR 191
LL EAYDRC EVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP
Sbjct: 127 LLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPM 186
Query: 192 ALDRWESRLEDLFQGRPYDMLDAALSDTVSKFPVDIQPFRDMIEGMRMDLRKSRYKNFDE 251
ALDRWE+RLEDLF+GRP+DMLDAAL+DTV+++PVDIQPFRDMIEGMRMDL+KSRY+NFD+
Sbjct: 187 ALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNFDD 246
Query: 252 LYLYCYYVAGTVGLMSVPVMGIEPQSQATTESIYSAALSLGIANQLTNILRDVGEDARRG 311
LYLYCYYVAGTVGLMSVPVMGI+P+S+ATTES+Y+AAL+LGIANQLTNILRDVGEDARRG
Sbjct: 247 LYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGEDARRG 306
Query: 312 RVYLPQDELAQEGLSDEDIFAGKVTDKWRNFMKKQIKRARLFFDEAEKGVTQLSSASRWP 371
RVYLPQDELAQ GLSDEDIFAGKVTDKWRNFMK Q+KRAR+FFDEAEKGVT+LS+ASRWP
Sbjct: 307 RVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAASRWP 366
Query: 372 VWASLLLYRQILDEIEANDYNNFTKRAYVSKSKKIAALPIAYARSVFGVS 421
VWASLLLYR+ILDEIEANDYNNFTKRAYV K KKIAALP+AYA+SV S
Sbjct: 367 VWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKSVLKTS 416
>AT5G17230.1 | PHYTOENE SYNTHASE | Chr5:5659839-5662087 REVERSE
LENGTH=422 | 201606
Length = 422
Score = 604 bits (1557), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 289/350 (82%), Positives = 328/350 (93%), Gaps = 5/350 (1%)
Query: 76 IISSSITSS-TGELTVSSSEQRVNDVVLKQAALVKEHLRSNR-DLDVKP--DIIVPGTLS 131
++SSS+ +S +GE+ +SS E++V +VVLKQAALV + LRS+ DLDVK D+++PG+LS
Sbjct: 68 VVSSSLVASPSGEIALSS-EEKVYNVVLKQAALVNKQLRSSSYDLDVKKPQDVVLPGSLS 126
Query: 132 LLNEAYDRCREVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPR 191
LL EAYDRC EVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP
Sbjct: 127 LLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPM 186
Query: 192 ALDRWESRLEDLFQGRPYDMLDAALSDTVSKFPVDIQPFRDMIEGMRMDLRKSRYKNFDE 251
ALDRWE+RLEDLF+GRP+DMLDAAL+DTV+++PVDIQPFRDMIEGMRMDL+KSRY+NFD+
Sbjct: 187 ALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNFDD 246
Query: 252 LYLYCYYVAGTVGLMSVPVMGIEPQSQATTESIYSAALSLGIANQLTNILRDVGEDARRG 311
LYLYCYYVAGTVGLMSVPVMGI+P+S+ATTES+Y+AAL+LGIANQLTNILRDVGEDARRG
Sbjct: 247 LYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGEDARRG 306
Query: 312 RVYLPQDELAQEGLSDEDIFAGKVTDKWRNFMKKQIKRARLFFDEAEKGVTQLSSASRWP 371
RVYLPQDELAQ GLSDEDIFAGKVTDKWRNFMK Q+KRAR+FFDEAEKGVT+LS+ASRWP
Sbjct: 307 RVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAASRWP 366
Query: 372 VWASLLLYRQILDEIEANDYNNFTKRAYVSKSKKIAALPIAYARSVFGVS 421
VWASLLLYR+ILDEIEANDYNNFTKRAYV K KKIAALP+AYA+SV S
Sbjct: 367 VWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKSVLKTS 416
>AT5G17230.3 | PHYTOENE SYNTHASE | Chr5:5659839-5662087 REVERSE
LENGTH=437 | 201606
Length = 437
Score = 596 bits (1536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 289/365 (79%), Positives = 328/365 (89%), Gaps = 20/365 (5%)
Query: 76 IISSSITSS-TGELTVSSSEQRVNDVVLKQAALVKEHLRSNR-DLDVKP--DIIVPGTLS 131
++SSS+ +S +GE+ +SS E++V +VVLKQAALV + LRS+ DLDVK D+++PG+LS
Sbjct: 68 VVSSSLVASPSGEIALSS-EEKVYNVVLKQAALVNKQLRSSSYDLDVKKPQDVVLPGSLS 126
Query: 132 LLNEAYDRCREVCAEYAKTFYLGTLLMTPERRKAIWAIYV---------------WCRRT 176
LL EAYDRC EVCAEYAKTFYLGTLLMTPERRKAIWAIYV WCRRT
Sbjct: 127 LLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVMLKVDFYKQSIVALVWCRRT 186
Query: 177 DELVDGPNASHITPRALDRWESRLEDLFQGRPYDMLDAALSDTVSKFPVDIQPFRDMIEG 236
DELVDGPNASHITP ALDRWE+RLEDLF+GRP+DMLDAAL+DTV+++PVDIQPFRDMIEG
Sbjct: 187 DELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEG 246
Query: 237 MRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIEPQSQATTESIYSAALSLGIANQ 296
MRMDL+KSRY+NFD+LYLYCYYVAGTVGLMSVPVMGI+P+S+ATTES+Y+AAL+LGIANQ
Sbjct: 247 MRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQ 306
Query: 297 LTNILRDVGEDARRGRVYLPQDELAQEGLSDEDIFAGKVTDKWRNFMKKQIKRARLFFDE 356
LTNILRDVGEDARRGRVYLPQDELAQ GLSDEDIFAGKVTDKWRNFMK Q+KRAR+FFDE
Sbjct: 307 LTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDE 366
Query: 357 AEKGVTQLSSASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKSKKIAALPIAYARS 416
AEKGVT+LS+ASRWPVWASLLLYR+ILDEIEANDYNNFTKRAYV K KKIAALP+AYA+S
Sbjct: 367 AEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKS 426
Query: 417 VFGVS 421
V S
Sbjct: 427 VLKTS 431