BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g1460.1
(500 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G47790.1 | F-box and associated interaction domains-containin... 80 7e-16
AT1G32420.1 | F-box and associated interaction domains-containin... 77 3e-15
AT4G38870.1 | F-box and associated interaction domains-containin... 74 6e-14
AT2G21930.2 | F-box associated ubiquitination effector family pr... 74 9e-14
AT2G02030.1 | F-box family protein | Chr2:482335-483829 FORWARD ... 70 7e-13
>AT1G47790.1 | F-box and associated interaction domains-containing
protein | Chr1:17600004-17601173 REVERSE LENGTH=389 |
201606
Length = 389
Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 144/333 (43%), Gaps = 69/333 (20%)
Query: 61 EILTRLPVKSLLRFKSVRKSWNSIIQTDENFIDLHLTRSKSRKPNLCLMATLPNQRCRPE 120
EIL RLPVKS++RF+ V K W+SII TD FI + T+S +R+ L C +
Sbjct: 32 EILLRLPVKSVVRFRCVSKLWSSII-TDPYFIKTYETQSSTRQSLLF---------CFKQ 81
Query: 121 FDEDFFLTCDLFEDFYKEEGKTREASIQFHNIRKSMPFYYDKITNSINGLICFIDSQFLH 180
D+ F + + + + +A+I ++ F Y T S++GLICF L
Sbjct: 82 SDKLFVFS---IPKHHYDSNSSSQAAIDRFQVKLPQEFSYPSPTESVHGLICF---HVLA 135
Query: 181 TPRLYNISTREESPLVKPMVVEKEKCDNSLLRSQSNYQFGYDPAKGEYKLVGLHVFCTLG 240
T ++N S R+ L KP KE GYDP +G++K+V L
Sbjct: 136 TVIVWNPSMRQFLTLPKPRKSWKE----------LTVFLGYDPIEGKHKVV------CLP 179
Query: 241 KSKPYSVCEVLTVLVARVGGEDNCNKLNRWRRIDEVPPYFVIAACPSVYLNGSIYWSSAA 300
+++ C+VLT+ A+ WR + + + G +Y+ +
Sbjct: 180 RNRTCDECQVLTLGSAQ----------KSWRTVKTKHKHRSTNDTWGRCIKGVVYYIA-- 227
Query: 301 PFYTGKQPHPCIIAFDVGSEKFRVISIPNFILDQPRKCVKDATAHEHQYHPSMFVDLLEV 360
Y CI++F V SEKF +I +P E+ Y M +
Sbjct: 228 --YVYHTRVWCIMSFHVKSEKFDMIKLP----------------LENIYRDVM----INY 265
Query: 361 DRRVALQMKMSSY---IVKLWILDDEKKENATS 390
+ R+A K+ + ++LWIL+D +K +S
Sbjct: 266 EGRLACVDKLYTLNNDGIRLWILEDAEKHKWSS 298
>AT1G32420.1 | F-box and associated interaction domains-containing
protein | Chr1:11701995-11702903 FORWARD LENGTH=302 |
201606
Length = 302
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 121/278 (43%), Gaps = 49/278 (17%)
Query: 58 IVYEILTRLPVKSLLRFKSVRKSWNSIIQTDENFIDLHLTRSKSRKPNLCLMATLPNQRC 117
+ EIL +LP KSLLRF+ V K W SII + +FID +TRS ++ P + +Q
Sbjct: 41 LTVEILKKLPAKSLLRFQCVSKQWLSIISSRRDFIDSIVTRSLTQPPPRDIKLIFHHQVL 100
Query: 118 RPEFDEDFFLTCDLFEDFYKEEGKTREASIQFHNIRKSMPFYYDKITNSINGLICFIDSQ 177
P FF+ + +E T AS +H +R GLIC S
Sbjct: 101 YP--GPHFFIFSSTYPQNTDKESLTTRAS-SYHYVR---------------GLICCW-SH 141
Query: 178 FLHTPRLYNISTREESPLVKPMVVEKEKCDNSLLRSQSNYQFGYDPAKGEYKLVGLHVFC 237
T +YN +TR+ + D + + FGYDP + +YK++ L +
Sbjct: 142 CPTTVDIYNPTTRQYYTVP----------DTNRYQYIETCFFGYDPVENQYKVMVLPKY- 190
Query: 238 TLGKSKPYSVCEVLTVLVARVGGEDNCNKLNRWRRIDEVPPYFVIAACPSVYLNGSIYWS 297
S C+V TV D K WR I + +F++ +V +NG IY+
Sbjct: 191 ----YMEESPCQVFTV-------GDPIEK--PWRDIQGIGVHFLLKD--AVCINGVIYYQ 235
Query: 298 SAAPFYTGKQPHPCIIAFDVGSEKFRVISIPNFILDQP 335
+ + + +++FDV SEKF + P + D P
Sbjct: 236 ATNEYGSTY----FLVSFDVRSEKFNHVKAPKILTDHP 269
>AT4G38870.1 | F-box and associated interaction domains-containing
protein | Chr4:18132583-18133863 REVERSE LENGTH=426 |
201606
Length = 426
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 153/352 (43%), Gaps = 70/352 (19%)
Query: 58 IVYEILTRLPVKSLLRFKSVRKSWNSIIQTDENFIDLHLTRSKSRKPNLCLMATLPNQRC 117
++ EIL +L +K L+RF V K W SII+ D F+ L L S R +L +
Sbjct: 57 LIMEILKKLSLKPLIRFLCVSKLWASIIR-DPYFMKLFLNESLKRPKSLVFVF------- 108
Query: 118 RPEFDEDFFLTCDL--FEDFYKEEGKTREASIQFHNIRKSMPFYYDK---ITNSINGLIC 172
R + F + L + + +SI +H + Y + I+ S++GLIC
Sbjct: 109 RAQSLGSIFSSVHLKSTREISSSSSSSSASSITYH-----VTCYTQQRMTISPSVHGLIC 163
Query: 173 FIDSQFLHTPRLYNISTREESPLVKPMVVEKEKCDNSLLRSQSNYQFGYDPAKGEYKLVG 232
+ L +YN TR + + + K K R N GYDP G YK+V
Sbjct: 164 YGPPSSLV---IYNPCTR------RSITLPKIKAG----RRAINQYIGYDPLDGNYKVVC 210
Query: 233 LHVFCTLGKSKPYSVCEVLTVLVARVGGEDNCNKLNRWRRI-DEVPPYFVIAACPSVYLN 291
+ + +++ + E + VL +G D + WR I D +PP+ ++ + +N
Sbjct: 211 ITRGMPMLRNR-RGLAEEIQVLT--LGTRD-----SSWRMIHDIIPPHSPVSE--ELCIN 260
Query: 292 GSIYWSSAAPFYTGKQPHPCIIAFDVGSEKFRVISIPNFILDQPRKCVKDATAHEHQYHP 351
G +Y+ + F K I++FDV SEKF +I +P C + + +Y
Sbjct: 261 GVLYYRA---FIGTKLNESAIMSFDVRSEKFDLIKVP---------CNFRSFSKLAKYEG 308
Query: 352 SMFVDLLEVDRRVALQMKMSSYIVKLWILDDEKKENATSSNQNWSEVTITLP 403
+ V E K +S I+ LWIL+D +SN WS+ T LP
Sbjct: 309 KLAVIFYE---------KKTSGIIGLWILED-------ASNGEWSKKTFALP 344
>AT2G21930.2 | F-box associated ubiquitination effector family
protein | Chr2:9347947-9349137 REVERSE LENGTH=396 |
201606
Length = 396
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 147/352 (41%), Gaps = 74/352 (21%)
Query: 58 IVYEILTRLPVKSLLRFKSVRKSWNSIIQTDENFIDLHLTRSKSRKPNLCLMATLPNQRC 117
++ EIL RLPVK+L RF SV K + SII+ + +F+ +L S +R +L C
Sbjct: 29 LIPEILKRLPVKTLARFLSVSKEYTSIIR-NRDFMKSYLINSSTRPQSLIFTIAGGGIHC 87
Query: 118 RPEFDEDFFLTCDLFEDFYKEEGKTREASIQFHNIRKSMPFYYDKITNSINGLICF--ID 175
FF D +G++ +S + + S++GLIC
Sbjct: 88 -------FFSLID--------QGESTSSSKPTY-LMNCPHLQLKTFAPSVHGLICHGPPS 131
Query: 176 SQFLHTPRLY--NISTREESPLVKPMVVEKEKCDNSLLRSQSNYQFGYDPAKGEYKLV-- 231
+ + +PRL N STR ++ P + +C + GYDP G+YK++
Sbjct: 132 TLIVSSPRLIVSNPSTRRS--IILPKIDANHEC--------IYHHMGYDPIDGDYKVLCM 181
Query: 232 --GLHVFCTLGKSKPYSVCEVLTVLVARVGGEDNCNKLNRWRRIDEVPPYFVIAA-CPSV 288
G+HV+ + Y E L V R G N WR +++ PP+ + P +
Sbjct: 182 MKGMHVY-----QRRYLAKE-LQVFTLRKG--------NSWRMVEDFPPHCLCHEDTPDL 227
Query: 289 YLNGSIYWSSAAPFYTGKQPHPCIIAFDVGSEKFRVISIPNFILDQPRKCVKDATAHEHQ 348
+NG +Y+ + + +++FDV SEKF +I +
Sbjct: 228 CINGVLYYVAMLDTASNHA----VMSFDVRSEKFDLIK----------------GGPDGD 267
Query: 349 YHPSMFVDLLEVDRRVALQMKMSSYIVKLWILDDEKKENATSSNQNWSEVTI 400
+P L + + AL S Y + LW+++D K + + + S ++
Sbjct: 268 LNPK----LTRYEGKPALLFPGSDYRINLWVIEDAAKHEWSKMSYDVSSTSL 315
>AT2G02030.1 | F-box family protein | Chr2:482335-483829 FORWARD
LENGTH=334 | 201606
Length = 334
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 47/291 (16%)
Query: 58 IVYEILTRLPVKSLLRFKSVRKSWNSIIQTDENFIDLHLTRSKSRKPNLCLMATLPNQRC 117
IV EIL RLPVKSL RF++V K W ++I T + F H+ KS+ L + R
Sbjct: 43 IVEEILVRLPVKSLTRFQTVSKHWRTLI-TSKYFGKRHMALEKSKGCKLLFVCDDFVDRA 101
Query: 118 RPEFDEDFFLTCDLFEDFYKEEGKTREASIQFHNIRKSMPFYYDKITNSINGLICFID-- 175
++ FL E EG E + +F + + I+ S +GL+CF D
Sbjct: 102 ----EDTLFLKTVALEKTSVSEGD--EQAFEFEGYKGFL-----DISESCDGLVCFYDTT 150
Query: 176 ----------SQFLHTP--RLYNISTREESPLVKPMVVEKEKCDNSLLRSQSNYQFGYDP 223
+ F+ P R+ + + +P V+ V+ + + S G D
Sbjct: 151 RAVEVMNPATTMFIELPLSRIQQLCIYKPNPEVELEPVQDPNPVLDPVMTCSQIGVGKDS 210
Query: 224 AKGEYKLVGLHVFCTLGKSKPYSVCEVLTVLVARVGGEDNCNKLNRWRRID--EVPPYFV 281
G YKLV + + T + P CEVL + +WR ++ + + +
Sbjct: 211 VSGSYKLVWM--YNTSPATPP--TCEVLDL------------DGKKWRFVNTTSLDHHQI 254
Query: 282 IAACPSVYLNGSIYW-SSAAPFYTGKQPHPCIIAFDVGSEKFRVISIPNFI 331
+ V+ NGS+YW + Y Q +I D+ +E F+VI P FI
Sbjct: 255 LCDQRPVFANGSLYWLTGDEEGYATTQTK--LIVLDLHTEMFQVIQTPPFI 303