BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g1470.1
(193 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G17230.4 | PHYTOENE SYNTHASE | Chr5:5659839-5662087 REVERSE L... 336 e-116
AT5G17230.2 | PHYTOENE SYNTHASE | Chr5:5659839-5662087 REVERSE L... 336 e-116
AT5G17230.1 | PHYTOENE SYNTHASE | Chr5:5659839-5662087 REVERSE L... 336 e-116
AT5G17230.3 | PHYTOENE SYNTHASE | Chr5:5659839-5662087 REVERSE L... 337 e-116
>AT5G17230.4 | PHYTOENE SYNTHASE | Chr5:5659839-5662087 REVERSE
LENGTH=422 | 201606
Length = 422
Score = 336 bits (862), Expect = e-116, Method: Compositional matrix adjust.
Identities = 157/187 (83%), Positives = 177/187 (94%)
Query: 1 MRMDIRKSRYKNFDELYLYCYYVAGTVGLMSVPVMRIEPQSQATTESIYSAALSLGRANQ 60
MRMD++KSRY+NFD+LYLYCYYVAGTVGLMSVPVM I+P+S+ATTES+Y+AAL+LG ANQ
Sbjct: 232 MRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQ 291
Query: 61 LTNILRDVGEDARRGRVYLPQDELAQEGLSDENIFAGKVTDKWRNFMKKQIKRARLFFDE 120
LTNILRDVGEDARRGRVYLPQDELAQ GLSDE+IFAGKVTDKWRNFMK Q+KRAR+FFDE
Sbjct: 292 LTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDE 351
Query: 121 AEKGVTQLSSASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKSKKIAALPIAYARS 180
AEKGVT+LS+ASRWPVWASLLLYR+ILDEIEANDYNNFTKRAYV K KKIAALP+AYA+S
Sbjct: 352 AEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKS 411
Query: 181 IFGVSRT 187
+ S +
Sbjct: 412 VLKTSSS 418
>AT5G17230.2 | PHYTOENE SYNTHASE | Chr5:5659839-5662087 REVERSE
LENGTH=422 | 201606
Length = 422
Score = 336 bits (862), Expect = e-116, Method: Compositional matrix adjust.
Identities = 157/187 (83%), Positives = 177/187 (94%)
Query: 1 MRMDIRKSRYKNFDELYLYCYYVAGTVGLMSVPVMRIEPQSQATTESIYSAALSLGRANQ 60
MRMD++KSRY+NFD+LYLYCYYVAGTVGLMSVPVM I+P+S+ATTES+Y+AAL+LG ANQ
Sbjct: 232 MRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQ 291
Query: 61 LTNILRDVGEDARRGRVYLPQDELAQEGLSDENIFAGKVTDKWRNFMKKQIKRARLFFDE 120
LTNILRDVGEDARRGRVYLPQDELAQ GLSDE+IFAGKVTDKWRNFMK Q+KRAR+FFDE
Sbjct: 292 LTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDE 351
Query: 121 AEKGVTQLSSASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKSKKIAALPIAYARS 180
AEKGVT+LS+ASRWPVWASLLLYR+ILDEIEANDYNNFTKRAYV K KKIAALP+AYA+S
Sbjct: 352 AEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKS 411
Query: 181 IFGVSRT 187
+ S +
Sbjct: 412 VLKTSSS 418
>AT5G17230.1 | PHYTOENE SYNTHASE | Chr5:5659839-5662087 REVERSE
LENGTH=422 | 201606
Length = 422
Score = 336 bits (862), Expect = e-116, Method: Compositional matrix adjust.
Identities = 157/187 (83%), Positives = 177/187 (94%)
Query: 1 MRMDIRKSRYKNFDELYLYCYYVAGTVGLMSVPVMRIEPQSQATTESIYSAALSLGRANQ 60
MRMD++KSRY+NFD+LYLYCYYVAGTVGLMSVPVM I+P+S+ATTES+Y+AAL+LG ANQ
Sbjct: 232 MRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQ 291
Query: 61 LTNILRDVGEDARRGRVYLPQDELAQEGLSDENIFAGKVTDKWRNFMKKQIKRARLFFDE 120
LTNILRDVGEDARRGRVYLPQDELAQ GLSDE+IFAGKVTDKWRNFMK Q+KRAR+FFDE
Sbjct: 292 LTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDE 351
Query: 121 AEKGVTQLSSASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKSKKIAALPIAYARS 180
AEKGVT+LS+ASRWPVWASLLLYR+ILDEIEANDYNNFTKRAYV K KKIAALP+AYA+S
Sbjct: 352 AEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKS 411
Query: 181 IFGVSRT 187
+ S +
Sbjct: 412 VLKTSSS 418
>AT5G17230.3 | PHYTOENE SYNTHASE | Chr5:5659839-5662087 REVERSE
LENGTH=437 | 201606
Length = 437
Score = 337 bits (863), Expect = e-116, Method: Compositional matrix adjust.
Identities = 157/187 (83%), Positives = 177/187 (94%)
Query: 1 MRMDIRKSRYKNFDELYLYCYYVAGTVGLMSVPVMRIEPQSQATTESIYSAALSLGRANQ 60
MRMD++KSRY+NFD+LYLYCYYVAGTVGLMSVPVM I+P+S+ATTES+Y+AAL+LG ANQ
Sbjct: 247 MRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQ 306
Query: 61 LTNILRDVGEDARRGRVYLPQDELAQEGLSDENIFAGKVTDKWRNFMKKQIKRARLFFDE 120
LTNILRDVGEDARRGRVYLPQDELAQ GLSDE+IFAGKVTDKWRNFMK Q+KRAR+FFDE
Sbjct: 307 LTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDE 366
Query: 121 AEKGVTQLSSASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKSKKIAALPIAYARS 180
AEKGVT+LS+ASRWPVWASLLLYR+ILDEIEANDYNNFTKRAYV K KKIAALP+AYA+S
Sbjct: 367 AEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKS 426
Query: 181 IFGVSRT 187
+ S +
Sbjct: 427 VLKTSSS 433