BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g1490.1
(148 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G66170.1 | RING/FYVE/PHD zinc finger superfamily protein | Ch... 92 2e-22
AT2G01810.1 | RING/FYVE/PHD zinc finger superfamily protein | Ch... 90 1e-21
AT1G33420.1 | RING/FYVE/PHD zinc finger superfamily protein | Ch... 67 1e-13
AT5G22260.1 | RING/FYVE/PHD zinc finger superfamily protein | Ch... 66 3e-13
AT1G33420.2 | RING/FYVE/PHD zinc finger superfamily protein | Ch... 58 3e-10
>AT1G66170.1 | RING/FYVE/PHD zinc finger superfamily protein |
Chr1:24638793-24641222 REVERSE LENGTH=704 | 201606
Length = 704
Score = 92.4 bits (228), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 75/134 (55%), Gaps = 17/134 (12%)
Query: 9 PTPLGGSFVENMEVFMETFCKVEDDSV-------TLLIPDKE---IKIFVVVQDMEIVLI 58
P G+F + + VF+ ++ED + TLL + + I +++V ++ +
Sbjct: 30 PIQRNGAFRDQIRVFLRDCAEIEDYDIRGMTVWCTLLSHETKSSLIPLYIVEEN-----V 84
Query: 59 QEPDEYFCENCIHIGWGHHLVSKRIYHFVIPADDEWQP--NKSPLDLDTHLLHGSIHSNG 116
+ E +C++C GW +H VSKR YHF+IP D EW D +H+LHG IH NG
Sbjct: 85 KHSSEPYCDHCRCTGWSNHFVSKRKYHFIIPIDTEWSLPLEDDAFDSQSHVLHGLIHCNG 144
Query: 117 FGHLLCINGLEGGS 130
FGHL+C+NG+E GS
Sbjct: 145 FGHLVCVNGMESGS 158
>AT2G01810.1 | RING/FYVE/PHD zinc finger superfamily protein |
Chr2:347537-349952 FORWARD LENGTH=697 | 201606
Length = 697
Score = 90.1 bits (222), Expect = 1e-21, Method: Composition-based stats.
Identities = 44/121 (36%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Query: 12 LGGSFVENMEVFMETFCKVEDDSV------TLLIPDKEIKIFVVVQDMEIVLIQEPDEYF 65
L +F +N+ F+ + ++ED ++ T+ + + + + +E +
Sbjct: 38 LAATFRDNIRSFLREYAEIEDYTIDGATVSTIFLGSQANGVVFPLYIIEQQISDSSPNPL 97
Query: 66 CENCIHIGWGHHLVSKRIYHFVIPADDEW-QP-NKSPLDLDTHLLHGSIHSNGFGHLLCI 123
C+ C GWGHH V+KR YH +IP DEW +P + L L +HL+HG IH NGFGHLLCI
Sbjct: 98 CDFCRCFGWGHHYVTKRKYHMIIPNRDEWNEPLKRESLTLSSHLMHGLIHCNGFGHLLCI 157
Query: 124 N 124
N
Sbjct: 158 N 158
>AT1G33420.1 | RING/FYVE/PHD zinc finger superfamily protein |
Chr1:12121063-12123346 REVERSE LENGTH=697 | 201606
Length = 697
Score = 67.4 bits (163), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 28/95 (29%)
Query: 65 FCENCIHIGWGHHLVSKRIYHFVIPADDEWQPNK-------------------------- 98
+CE+C +GW H V ++ Y F+I + + +
Sbjct: 109 YCEHCCVVGWSSHPVCRKRYRFIIRSGGDTKACTRCGNTQNLSEGSNCKWCSMALDIENW 168
Query: 99 --SPLDLDTHLLHGSIHSNGFGHLLCINGLEGGSG 131
S L+ +THLLHG IHSNG+ HLLC+NG EGGSG
Sbjct: 169 VYSQLEDNTHLLHGVIHSNGYAHLLCLNGREGGSG 203
>AT5G22260.1 | RING/FYVE/PHD zinc finger superfamily protein |
Chr5:7367707-7370192 REVERSE LENGTH=672 | 201606
Length = 672
Score = 66.2 bits (160), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 21/101 (20%)
Query: 46 IFVVVQDMEIVLIQEPDEYFCENCIHIGWGHHLVSKRIYHFVIPADDEWQ---------- 95
+FVV + +E L C +C ++GWG+ ++ + YHFVIP+ +
Sbjct: 83 LFVVEEPIEASL-----NLRCNHCQYVGWGNQMICNKKYHFVIPSKETMAAFLKLEGGGY 137
Query: 96 --PNKSP----LDLDTHLLHGSIHSNGFGHLLCINGLEGGS 130
P K ++L H+LHG HSNGFGHLL +NG+E GS
Sbjct: 138 AFPEKESFSHLVELQGHVLHGFFHSNGFGHLLSLNGIETGS 178
>AT1G33420.2 | RING/FYVE/PHD zinc finger superfamily protein |
Chr1:12121063-12122928 REVERSE LENGTH=592 | 201606
Length = 592
Score = 57.8 bits (138), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/33 (72%), Positives = 28/33 (84%)
Query: 99 SPLDLDTHLLHGSIHSNGFGHLLCINGLEGGSG 131
S L+ +THLLHG IHSNG+ HLLC+NG EGGSG
Sbjct: 66 SQLEDNTHLLHGVIHSNGYAHLLCLNGREGGSG 98