BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0010.1
(202 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G03270.2 | Cyclin D6%3B1 | Chr4:1432375-1433691 REVERSE LENGT... 142 3e-41
AT4G03270.1 | Cyclin D6%3B1 | Chr4:1432375-1433691 REVERSE LENGT... 140 1e-40
AT5G65420.4 | CYCLIN D4%3B1 | Chr5:26142300-26143750 REVERSE LEN... 92 2e-22
AT5G65420.1 | CYCLIN D4%3B1 | Chr5:26141592-26143750 REVERSE LEN... 92 2e-22
AT1G70210.1 | CYCLIN D1%3B1 | Chr1:26440015-26441980 FORWARD LEN... 92 3e-22
>AT4G03270.2 | Cyclin D6%3B1 | Chr4:1432375-1433691 REVERSE
LENGTH=301 | 201606
Length = 301
Score = 142 bits (357), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/225 (42%), Positives = 130/225 (57%), Gaps = 44/225 (19%)
Query: 1 MEFDLENHSLSSSSSSD----------LIESLFTSETNHIPSPNYINILKTTDFRNSIRL 50
MEF LE H LS SS + L SLF E H+PS +Y + LK++ F S R
Sbjct: 1 MEFHLE-HPLSHSSLHNNFNDDTDYETLPHSLFLVEFQHMPSSHYFHSLKSSAFLLSNRN 59
Query: 51 QAISLILQFTKKFD-PITSYLAVNYLDRFISMKEMKGE---------------------- 87
QAIS I Q+++KFD P +YLAVNYLDRF+S ++M +
Sbjct: 60 QAISSITQYSRKFDDPSLTYLAVNYLDRFLSSEDMPSKPWILKLISLSCVSLSAKMRKPD 119
Query: 88 -------VDGYAFDSETIQRTELLILGDLNWRMRSITPFSFFSFFISFFKLKD---LSLQ 137
V+G FD++ I+R E +ILG L WRMRS+TPFSF +FFIS F+LK+ L L+
Sbjct: 120 MSVSDLPVEGEFFDAQMIERMENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPLLLK 179
Query: 138 KSLRSKATEIITKSLPEISLLEFKSSIIAASALVSACEELFPLEF 182
SL+S+ +++ +IS LEFK S+IA +AL+ A EL PL+F
Sbjct: 180 HSLKSQTSDLTFSLQHDISFLEFKPSVIAGAALLFASFELCPLQF 224
>AT4G03270.1 | Cyclin D6%3B1 | Chr4:1432375-1433691 REVERSE
LENGTH=302 | 201606
Length = 302
Score = 140 bits (353), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 129/226 (57%), Gaps = 45/226 (19%)
Query: 1 MEFDLENHSLSSSSSSD----------LIESLFTSETNHIPSPNYINILKTTDFRNSIRL 50
MEF LE H LS SS + L SLF E H+PS +Y + LK++ F S R
Sbjct: 1 MEFHLE-HPLSHSSLHNNFNDDTDYETLPHSLFLVEFQHMPSSHYFHSLKSSAFLLSNRN 59
Query: 51 QAISLILQFTKKFD-PITSYLAVNYLDRFISMKEMKGE---------------------- 87
QAIS I Q+++KFD P +YLAVNYLDRF+S ++M
Sbjct: 60 QAISSITQYSRKFDDPSLTYLAVNYLDRFLSSEDMPQSKPWILKLISLSCVSLSAKMRKP 119
Query: 88 --------VDGYAFDSETIQRTELLILGDLNWRMRSITPFSFFSFFISFFKLKD---LSL 136
V+G FD++ I+R E +ILG L WRMRS+TPFSF +FFIS F+LK+ L L
Sbjct: 120 DMSVSDLPVEGEFFDAQMIERMENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPLLL 179
Query: 137 QKSLRSKATEIITKSLPEISLLEFKSSIIAASALVSACEELFPLEF 182
+ SL+S+ +++ +IS LEFK S+IA +AL+ A EL PL+F
Sbjct: 180 KHSLKSQTSDLTFSLQHDISFLEFKPSVIAGAALLFASFELCPLQF 225
>AT5G65420.4 | CYCLIN D4%3B1 | Chr5:26142300-26143750 REVERSE
LENGTH=271 | 201606
Length = 271
Score = 92.0 bits (227), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 36/218 (16%)
Query: 1 MEFDLENHSLSSSSSSDLIESLFTSETNHIPSPNYINILKTTDFR-NSIRLQAISLILQF 59
+E + S S S ++I + E H+PS +YI L++ D N R A++ I +
Sbjct: 29 IEISIPQMGFSQSESEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKA 88
Query: 60 TK--KFDPITSYLAVNYLDRFISMKEM---KGEV-------------------------- 88
+ +F P+ LA+NYLDRF+S+ ++ KG +
Sbjct: 89 CEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDL 148
Query: 89 ----DGYAFDSETIQRTELLILGDLNWRMRSITPFSFFSFFISFFKLKDLSLQKSLRSKA 144
+ F+++++QR ELL+L L WR+R+ITP S+ +F+ D +L S++
Sbjct: 149 QVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRS 208
Query: 145 TEIITKSLPEISLLEFKSSIIAASALVSACEELFPLEF 182
++I + I LEF+ S +AA+ +S EL + F
Sbjct: 209 LQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHF 246
>AT5G65420.1 | CYCLIN D4%3B1 | Chr5:26141592-26143750 REVERSE
LENGTH=308 | 201606
Length = 308
Score = 92.4 bits (228), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 36/218 (16%)
Query: 1 MEFDLENHSLSSSSSSDLIESLFTSETNHIPSPNYINILKTTDFR-NSIRLQAISLILQF 59
+E + S S S ++I + E H+PS +YI L++ D N R A++ I +
Sbjct: 29 IEISIPQMGFSQSESEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKA 88
Query: 60 TK--KFDPITSYLAVNYLDRFISMKEM---KGEV-------------------------- 88
+ +F P+ LA+NYLDRF+S+ ++ KG +
Sbjct: 89 CEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDL 148
Query: 89 ----DGYAFDSETIQRTELLILGDLNWRMRSITPFSFFSFFISFFKLKDLSLQKSLRSKA 144
+ F+++++QR ELL+L L WR+R+ITP S+ +F+ D +L S++
Sbjct: 149 QVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRS 208
Query: 145 TEIITKSLPEISLLEFKSSIIAASALVSACEELFPLEF 182
++I + I LEF+ S +AA+ +S EL + F
Sbjct: 209 LQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHF 246
>AT1G70210.1 | CYCLIN D1%3B1 | Chr1:26440015-26441980 FORWARD
LENGTH=339 | 201606
Length = 339
Score = 92.4 bits (228), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 99/201 (49%), Gaps = 38/201 (18%)
Query: 13 SSSSDLIESLFTSETNHIPSPNYINILKTTDFRNSIRLQAISLIL--QFTKKFDPITSYL 70
S D I E + +P +Y++ +T S R +++ IL Q F P+T+YL
Sbjct: 46 SWPGDSIACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYL 105
Query: 71 AVNYLDRFI---SMKEMKG----------------------------EVDG--YAFDSET 97
AVNY+DRF+ + E G +V G Y F+++T
Sbjct: 106 AVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKT 165
Query: 98 IQRTELLILGDLNWRMRSITPFSFFSFFISFFKL-KDLSLQKSLRSKATEIITKSLPEIS 156
I+R ELL+L L+WR+RS+TPF F SFF +K+ + S ATEII ++ E S
Sbjct: 166 IKRMELLVLSVLDWRLRSVTPFDFISFFA--YKIDPSGTFLGFFISHATEIILSNIKEAS 223
Query: 157 LLEFKSSIIAASALVSACEEL 177
LE+ S IAA+A++ EL
Sbjct: 224 FLEYWPSSIAAAAILCVANEL 244