BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0050.1
(496 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65850.1 | F-box and associated interaction domains-containin... 76 1e-14
AT4G38870.1 | F-box and associated interaction domains-containin... 68 5e-12
AT1G70970.1 | F-box and associated interaction domains-containin... 66 2e-11
AT3G06240.1 | F-box family protein | Chr3:1887336-1888619 FORWAR... 66 3e-11
AT2G31470.1 | F-box and associated interaction domains-containin... 65 6e-11
>AT5G65850.1 | F-box and associated interaction domains-containing
protein | Chr5:26346317-26347495 FORWARD LENGTH=392 |
201606
Length = 392
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 129/300 (43%), Gaps = 70/300 (23%)
Query: 32 EILTRLPVKSLIRFKSVCKRWCSMIQKDQKFIDLHLTRSKARHLRRLFIVVPVPKTKAEI 91
EIL RLP KS+ + V K W S+I + Q F +L LTRS R P+
Sbjct: 42 EILLRLPAKSIATCRCVSKLWISVICR-QDFTELFLTRSLHR-----------PQLLFCC 89
Query: 92 KREKELAGCFFLDNWPYKSFHVTADLVLFEDKGITKVVVDTVREVDSSSYNIISKPVNGL 151
K++ L FF + ++ + + + ++ + Y I S+PVNGL
Sbjct: 90 KKDGNL---FFFSSPQLQNPYENSSAISLKNFSL--------------CYKI-SRPVNGL 131
Query: 152 VCLIDSE-DEYAVRICNISTGELSPWFESSLLSEKIEHNGVPVDRMCKNYSDTHSNYQFG 210
+C E +E ICN STG +L K + R F
Sbjct: 132 ICFKRKEMNETVTVICNPSTGH-------TLSLPKPMKTSIGPSRF------------FV 172
Query: 211 FDPITNQHKLVCVWKVTTRADNRGDLICEVLTIGHRGVWGNNRWRRIDEVPPNGLANDSI 270
++PI Q K++ +K +D +VLT+G G WR I+ P+ L I
Sbjct: 173 YEPIQKQFKVLLSYK----SDEH-----QVLTLGT----GELSWRIIECSMPHILGMSEI 219
Query: 271 YVNGVIYWGTNELANGEWETNGSPICIVAFDVGNEKFREIIVPDSILFQPRDDFEVSYHG 330
+NGV+Y+ L++G++ IV FDV +EKFR I V + + D ++Y+G
Sbjct: 220 CINGVLYYPAINLSSGDY-------IIVCFDVRSEKFRFITVMEEFIKAAHDGTLINYNG 272
>AT4G38870.1 | F-box and associated interaction domains-containing
protein | Chr4:18132583-18133863 REVERSE LENGTH=426 |
201606
Length = 426
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 129/308 (41%), Gaps = 57/308 (18%)
Query: 10 RTKTTTTTTNSLIDSDDWLLYEEILTRLPVKSLIRFKSVCKRWCSMIQKDQKFIDLHLTR 69
R K T + NS + D ++ EIL +L +K LIRF V K W S+I +D F+ L L
Sbjct: 40 RKKFTKVSVNSELLPVDLIM--EILKKLSLKPLIRFLCVSKLWASII-RDPYFMKLFLNE 96
Query: 70 SKARHLRRLFIVVPVPKTKAEIKREKELAGCFFLDNWPYKSFHVTADLVLFEDKGITKVV 129
S R PK+ + R + L F S H+ + + +
Sbjct: 97 SLKR-----------PKSLVFVFRAQSLGSIF-------SSVHLKSTREISSSSSSSSAS 138
Query: 130 VDTVREVDSSSYNI-ISKPVNGLVCLIDSEDEYAVRICNISTGELSPWFESSLLSEKIEH 188
T + + IS V+GL+C ++ I N P S+ KI+
Sbjct: 139 SITYHVTCYTQQRMTISPSVHGLICY---GPPSSLVIYN-------PCTRRSITLPKIKA 188
Query: 189 NGVPVDRMCKNYSDTHSNYQFGFDPITNQHKLVCVWKVTTRADNRGDLI--CEVLTIGHR 246
+ N G+DP+ +K+VC+ + NR L +VLT+G R
Sbjct: 189 GRRAI------------NQYIGYDPLDGNYKVVCITRGMPMLRNRRGLAEEIQVLTLGTR 236
Query: 247 GVWGNNRWRRI-DEVPPNGLANDSIYVNGVIYWGTNELANGEWETNGSPICIVAFDVGNE 305
++ WR I D +PP+ ++ + +NGV+Y+ T + I++FDV +E
Sbjct: 237 ----DSSWRMIHDIIPPHSPVSEELCINGVLYY------RAFIGTKLNESAIMSFDVRSE 286
Query: 306 KFREIIVP 313
KF I VP
Sbjct: 287 KFDLIKVP 294
>AT1G70970.1 | F-box and associated interaction domains-containing
protein | Chr1:26759834-26761042 FORWARD LENGTH=402 |
201606
Length = 402
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 140/303 (46%), Gaps = 60/303 (19%)
Query: 29 LYEEILTRLPVKSLIRFKSVCKRWCSMIQKDQKFIDLHLTRSKAR-----HLRRLFIVVP 83
L EI++ LP+KSL+RF V K+W S+I+ +Q F L+L RS R +RR+ + P
Sbjct: 14 LQTEIMSWLPLKSLLRFVIVSKKWASIIRGEQ-FKALYLRRSMTRPRLMFMVRRIATLPP 72
Query: 84 VPKT---KAEIKREKELAGCFFLDNWPYKSFH-VTADLVLFEDKGITKVVVDTVREVDSS 139
P+ ++ K E+ + G ++ FH V + + + G + +R ++
Sbjct: 73 EPEMVWFQSFCKEERCIPGQLEVEFL----FHSVYQEKIPYFSSGQQQ-----LRVPPNT 123
Query: 140 SYNIISKPVNGLVCLIDSEDEYAVRICNISTGELSPWFESSLLSEKIEHNGVPVDRMCKN 199
+Y +S+P+ GL+CL SE ++A +CN T +S L + H +
Sbjct: 124 NYTSVSQPIGGLICL-QSETKFA--LCNPGTK------KSRALPDIQAHEKAFITSF--- 171
Query: 200 YSDTHSNYQFGFDPITNQHKLVCVWKVTTRADNRGDLICEVLTIGHRGVWGNNRWRRI-- 257
G+D TN K++C+ V ++ +VLT+ GV + WR I
Sbjct: 172 ---------LGYDEATNVFKVLCLTMVWAHEPSKRVYEYQVLTV-ESGV-ESCSWRGITC 220
Query: 258 ---DEVPP-NGLANDSIYVNGVIYWGTNELANGEWETNGSPICIVAFDVGNEKFREIIVP 313
D P GL GV+Y+G ++ P+ +++F+V +++F I +P
Sbjct: 221 KEKDHTPETQGLCK-----GGVLYYGARSTSDHR------PL-VMSFNVRSQEFTAIELP 268
Query: 314 DSI 316
D +
Sbjct: 269 DQL 271
>AT3G06240.1 | F-box family protein | Chr3:1887336-1888619 FORWARD
LENGTH=427 | 201606
Length = 427
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 59/303 (19%)
Query: 32 EILTRLPVKSLIRFKSVCKRWCSMIQKDQKF----IDLHLTRSKARHLRRLFIVVPVPKT 87
EIL RLP KS+ RF+ V K +C++ D F +DL L R L R IV
Sbjct: 43 EILLRLPAKSIGRFRCVSKLFCTL-SSDPGFAKIHLDLILRNESVRSLHRKLIVSSHNLY 101
Query: 88 KAEIKRE----KELAGCFFLDNWPYKSF-HVTADLV-------LFEDKGITKVVVDTVRE 135
+ ++LA N+P K + ++++ L++D+ + + +
Sbjct: 102 SLDFNSIGDGIRDLAAVEH--NYPLKDDPSIFSEMIRNYVGDHLYDDRRV-------MLK 152
Query: 136 VDSSSYNI----ISKPVNGLVCLIDSEDEYAVRICNISTGELSPWFESSLLSEKIEHNGV 191
+++ SY I NGLVC+ S E AV + N +TG+ S L E V
Sbjct: 153 LNAKSYRRNWVEIVGSSNGLVCI--SPGEGAVFLYNPTTGD------SKRLPENFRPKSV 204
Query: 192 PVDRMCKNYSDTHSNYQFGFDPITNQHKLVCVWKVTTRADNRGDLICEVLTIGHRGVWGN 251
+R D Y FGFD +T+ +KLV K+ +++ D L
Sbjct: 205 EYER------DNFQTYGFGFDGLTDDYKLV---KLVATSEDILDASVYSLKA-------- 247
Query: 252 NRWRRIDEVPPNGLANDSIYVNGVIYWGTNELANGEWETNGSPICIVAFDVGNEKFREII 311
+ WRRI + N ND Y +GV + G E N +VAFD+ E+FRE+
Sbjct: 248 DSWRRICNL--NYEHNDGSYTSGVHFNGAIHWVFTESRHNQR--VVVAFDIQTEEFREMP 303
Query: 312 VPD 314
VPD
Sbjct: 304 VPD 306
>AT2G31470.1 | F-box and associated interaction domains-containing
protein | Chr2:13407492-13408655 REVERSE LENGTH=387 |
201606
Length = 387
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 132/305 (43%), Gaps = 69/305 (22%)
Query: 32 EILTRLPVKSLIRFKSVCKRWCSMIQKDQKFIDLHLTRSKARHLRRLFIVVPVPKTKAEI 91
EI +R PVKS+ R + V K W S+++ F +L+LT+S AR P+
Sbjct: 32 EIFSRSPVKSIARCRCVSKLWASILRLPY-FTELYLTKSCAR-----------PRLLFAC 79
Query: 92 KREKELAGCFFLDNWPYKSFHVTADLVLFEDKGITKVVVDTVREVDSSSYNIISKPVNGL 151
++ +EL FF P+ ++ L K+ D +NIIS P+ GL
Sbjct: 80 QKHRELF--FFSTPQPHNPNESSSPLA---ASFHMKIPFD-------GRFNIIS-PIGGL 126
Query: 152 VCLIDSEDEYAVRICNISTGELSPWFESSLLSEKIEHN-GVPVDRMCKNYSDTHSNYQFG 210
V VR I G +P F S++ + + +P + K T FG
Sbjct: 127 V---------FVRYEQILKGRKTPEFVSAICNPSTGQSLTLPKPKTRKRIWGTS---HFG 174
Query: 211 FDPITNQHKLVCVWKVTTRADNRGDLICE---VLTIGHRGVWGNNRWRRIDEVPPNGLAN 267
+DPI Q K++ + N GD + + VLT+G N WRRI+ P+ +
Sbjct: 175 YDPIEKQFKVLSM--------NIGDGVYKEHYVLTLGTE----NLSWRRIECSIPHVHGS 222
Query: 268 DSIYVNGVIYWGTNELANGEWETNGSPICIVAFDVGNEKFR--EIIVPDSILFQPRDDFE 325
I +NGV+Y+ + + + IV FDV EKF +I+ P + L
Sbjct: 223 KGICINGVLYY------RAKADMFSGTLMIVCFDVRFEKFSYIKILKPTTTL-------- 268
Query: 326 VSYHG 330
+SY+G
Sbjct: 269 ISYNG 273