BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0140.1
(460 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 82 4e-16
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 57 2e-08
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 10/184 (5%)
Query: 284 ESLWKEKFRNNFLSVGDKNTKFFHSQAIQRNRTNKIIAIKDTDGEWHEGLEDIQAIFTS- 342
ES +++K R +L GD NT+FFH + N I ++ D E + ++ + +
Sbjct: 432 ESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAY 491
Query: 343 --HLLNTSTSQGHNPNHTI----LNLFHHTITLEQNIELFSIPDQEEINSAISSLKKEAA 396
HLL S S P+ ++ F TL L ++P +EI +A+ ++ + A
Sbjct: 492 YTHLLG-SDSDILTPDSVQRIKDIHPFRCNDTLAS--RLSALPSDKEITAAVFAMPRNKA 548
Query: 397 PGPDGYPPFFFQSNWDTVSPNIYSLVQEFFRSAELPQDTNHTHICLIPKTTTPQTPADYR 456
PGPD + FF +W V + + V+EFFR+ L + N T I LIPK T + +R
Sbjct: 549 PGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFR 608
Query: 457 PISS 460
P+S
Sbjct: 609 PVSC 612
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 139 LVIGDLNVILDNQDKEGGKATS--NSNTYKIQSYINNLNLTDMGFKGHPYTWNNRQFGEN 196
+++GD + I D TS + Q+ + + +L D+ +G YTW+N Q +N
Sbjct: 222 ILVGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQ-DDN 280
Query: 197 FIQERLDRALANLPWLQNFQLSSISHLDSVG-SDHLPILLADTDLSSNKPKPFKFVRTWM 255
I +LDRA+AN W +F S+I+ + G SDH P ++ +L K F++
Sbjct: 281 PIIRKLDRAIANGDWFSSFP-SAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFSFLS 339
Query: 256 SHP 258
+HP
Sbjct: 340 THP 342
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 7/155 (4%)
Query: 120 KLKLWKTLNTLKVQDE---TPWLVIGDLNVILDNQDKEGGKAT--SNSNTYKIQSYINNL 174
+ LW + L +PWLV+GD N I + + S +Q+ + +
Sbjct: 101 RRSLWDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMRDS 160
Query: 175 NLTDMGFKGHPYTWNNRQFGENFIQERLDRALANLPWLQNFQLSSISHLDSVGSDHLP-I 233
+L D+ +G YTW+N Q +N I +LDRA+ N WL F +S SDH +
Sbjct: 161 DLVDLPCRGVLYTWSNHQ-QDNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAACM 219
Query: 234 LLADTDLSSNKPKPFKFVRTWMSHPDCHKFISDKW 268
++ + +K K FK+ +HPD I W
Sbjct: 220 VILNNSPPLSKKKSFKYFSFLSTHPDFISSILAAW 254