BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0210.1
(402 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 170 4e-46
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 170 4e-46
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 105 5e-26
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 54 5e-09
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 170 bits (431), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 178/384 (46%), Gaps = 66/384 (17%)
Query: 1 LSIVAHGNLEVEQLDVKTVFLHRDLEEEIYMAQPEGYKVEGKE----NQVCRLRKSLYGL 56
L+I A N + QLD+ FL+ DL+EEIYM P GY + N VC L+KS+YGL
Sbjct: 180 LAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGL 239
Query: 57 KQSPRQWYKRFDFFMLKYGFRRSDYDCCVYIKKLREGDFIYLLLYVDDMLIASRSMVDID 116
KQ+ RQW+ +F ++ +GF +S D Y K+ F+ +L+YVDD++I S + +D
Sbjct: 240 KQASRQWFLKFSVTLIGFGFVQSHSD-HTYFLKITATLFLCVLVYVDDIIICSNNDAAVD 298
Query: 117 NLKSQLSQEFEMKDMGAALKILRMEIKRKRSSKKLYLSQKGHIERVVFRFEMQNAKAVST 176
LKSQL F+++D+G L +EI RS+ + + Q+ + ++ + K S
Sbjct: 299 ELKSQLKSCFKLRDLGPLKYFLGLEI--ARSAAGINICQRKYALDLLDETGLLGCKPSSV 356
Query: 177 PLAPHFRLSGRQSPTTTVEKDHMDRVPYGSAVGSLMYSMVCTRPDISQTVSVVSRFMANP 236
P+ P S D +D Y +G LMY + TR DIS V+ +S+F P
Sbjct: 357 PMDPSVTFSAHSG------GDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAP 409
Query: 237 GKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQLSSYVDSDYAGDLDKRPSTTGYV----- 290
H +AV +L Y+KGTV GL + QL + D+ + D R ST GY
Sbjct: 410 RLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGT 469
Query: 291 --------------------------------------FRVHGAPVS------C--QSAI 304
FR P+S C +AI
Sbjct: 470 SLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAI 529
Query: 305 HLAKNQVHHARTNHIDVRYHFVRD 328
H+A N V H RT HI+ H VR+
Sbjct: 530 HIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 170 bits (431), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 178/384 (46%), Gaps = 66/384 (17%)
Query: 1 LSIVAHGNLEVEQLDVKTVFLHRDLEEEIYMAQPEGYKVEGKE----NQVCRLRKSLYGL 56
L+I A N + QLD+ FL+ DL+EEIYM P GY + N VC L+KS+YGL
Sbjct: 180 LAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGL 239
Query: 57 KQSPRQWYKRFDFFMLKYGFRRSDYDCCVYIKKLREGDFIYLLLYVDDMLIASRSMVDID 116
KQ+ RQW+ +F ++ +GF +S D Y K+ F+ +L+YVDD++I S + +D
Sbjct: 240 KQASRQWFLKFSVTLIGFGFVQSHSD-HTYFLKITATLFLCVLVYVDDIIICSNNDAAVD 298
Query: 117 NLKSQLSQEFEMKDMGAALKILRMEIKRKRSSKKLYLSQKGHIERVVFRFEMQNAKAVST 176
LKSQL F+++D+G L +EI RS+ + + Q+ + ++ + K S
Sbjct: 299 ELKSQLKSCFKLRDLGPLKYFLGLEI--ARSAAGINICQRKYALDLLDETGLLGCKPSSV 356
Query: 177 PLAPHFRLSGRQSPTTTVEKDHMDRVPYGSAVGSLMYSMVCTRPDISQTVSVVSRFMANP 236
P+ P S D +D Y +G LMY + TR DIS V+ +S+F P
Sbjct: 357 PMDPSVTFSAHSG------GDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAP 409
Query: 237 GKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQLSSYVDSDYAGDLDKRPSTTGYV----- 290
H +AV +L Y+KGTV GL + QL + D+ + D R ST GY
Sbjct: 410 RLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGT 469
Query: 291 --------------------------------------FRVHGAPVS------C--QSAI 304
FR P+S C +AI
Sbjct: 470 SLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAI 529
Query: 305 HLAKNQVHHARTNHIDVRYHFVRD 328
H+A N V H RT HI+ H VR+
Sbjct: 530 HIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 105 bits (262), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 108/195 (55%), Gaps = 11/195 (5%)
Query: 96 IYLLLYVDDMLIASRSMVDIDNLKSQLSQEFEMKDMGAALKILRMEIKRKRSSKKLYLSQ 155
+YLLLYVDD+L+ S ++ L QLS F MKD+G L ++IK S L+LSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 156 KGHIERVVFRFEMQNAKAVSTPLAPHFRLSGRQSPTTTVEKDHMDRVPYGSAVGSLMYSM 215
+ E+++ M + K +STPL L S +T D D + S VG+L Y +
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLP----LKLNSSVSTAKYPDPSD---FRSIVGALQY-L 110
Query: 216 VCTRPDISQTVSVVSRFMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQLSSYVDS 274
TRPDIS V++V + M P ++ +K VLRY+KGT+ GL ++ + ++ DS
Sbjct: 111 TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDS 170
Query: 275 DYAGDLDKRPSTTGY 289
D+AG R STTG+
Sbjct: 171 DWAGCTSTRRSTTGF 185
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 54.3 bits (129), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 212 MYSMVCTRPDISQTVSVVSRFMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQLSS 270
MY + TRPD++ V+ +S+F + +AV VL Y+KGTV GL + + QL +
Sbjct: 1 MY-LTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59
Query: 271 YVDSDYAGDLDKRPSTTGY 289
+ DSD+A D R S TG+
Sbjct: 60 FADSDWASCPDTRRSVTGF 78