BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0260.1
(169 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 43 5e-05
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 43 5e-05
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 43.1 bits (100), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 75/187 (40%), Gaps = 26/187 (13%)
Query: 3 YNSKGNVREY----------------IIDMSNMVTKLRELRLVLSQDILVHLILISLHAQ 46
YNS G + Y I+ + V KL ++L+L+ + + L L
Sbjct: 137 YNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDIS 196
Query: 47 YNTLNISL---------PLMLEGVLESEPSARWCKIVMCVYEFDQITTIWSERFERLMDD 97
LN L P +S P C + +Y Q + W +F +
Sbjct: 197 NAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIG 256
Query: 98 MGFARCWTDGTFYMHLSVHGLKTIAMMHFDEIIIMGDDSSFINNTRTLLTRTCDLTPLGD 157
GF + +D T+++ ++ L +++ D+III ++ + ++ ++ L L LG
Sbjct: 257 FGFVQSHSDHTYFLKITA-TLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGP 315
Query: 158 ARHFAGL 164
++F GL
Sbjct: 316 LKYFLGL 322
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 43.1 bits (100), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 75/187 (40%), Gaps = 26/187 (13%)
Query: 3 YNSKGNVREY----------------IIDMSNMVTKLRELRLVLSQDILVHLILISLHAQ 46
YNS G + Y I+ + V KL ++L+L+ + + L L
Sbjct: 137 YNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDIS 196
Query: 47 YNTLNISL---------PLMLEGVLESEPSARWCKIVMCVYEFDQITTIWSERFERLMDD 97
LN L P +S P C + +Y Q + W +F +
Sbjct: 197 NAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIG 256
Query: 98 MGFARCWTDGTFYMHLSVHGLKTIAMMHFDEIIIMGDDSSFINNTRTLLTRTCDLTPLGD 157
GF + +D T+++ ++ L +++ D+III ++ + ++ ++ L L LG
Sbjct: 257 FGFVQSHSDHTYFLKITA-TLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGP 315
Query: 158 ARHFAGL 164
++F GL
Sbjct: 316 LKYFLGL 322