BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0330.1
(1346 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 326 2e-93
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 326 2e-93
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 146 6e-39
ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C... 114 3e-29
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 92 7e-21
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 326 bits (835), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 206/554 (37%), Positives = 297/554 (53%), Gaps = 51/554 (9%)
Query: 779 LQQQQQDVSVHTRPKRLYKPV-------------------QRLGSDK--PLRHYGQANLV 817
+Q + SVHT +R KP Q L +K PL H + LV
Sbjct: 22 IQNDVPEPSVHTSHRRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYH---SFLV 78
Query: 818 EYALSVEDDEPVTFKQAITAEESESWLVAMQEEMESLHKNQTWEVVPLPEGKSVIGCKWV 877
A + EP T+ +A +E W AM +E+ ++ TWE+ LP K IGCKWV
Sbjct: 79 CIA---KAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWV 132
Query: 878 YKKKEDSSEIKGT--RYKAILVAKGYAQKEGVDYNEIFSPIVKHTSIRVLLSIVAHSDLE 935
YK K +S GT RYKA LVAKGY Q+EG+D+ E FSP+ K TS++++L+I A +
Sbjct: 133 YKIKYNS---DGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFT 189
Query: 936 LEQLDVKTAFLHGDLEEEIYMAQPEGYKVEGKE----NQVCCLRKSLYGLKQSPRQWYKR 991
L QLD+ AFL+GDL+EEIYM P GY + N VC L+KS+YGLKQ+ RQW+ +
Sbjct: 190 LHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLK 249
Query: 992 FDFFMPEHGFRRSDYDCCVYIKKFREGDFIYLLLYVDDMLIASRSMVEIDKLKSQLSQEF 1051
F + GF +S D Y K F+ +L+YVDD++I S + +D+LKSQL F
Sbjct: 250 FSVTLIGFGFVQSHSD-HTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCF 308
Query: 1052 EMKDMGAAKKILGMEIKRERSSKKLYLSQKGYIERVVSRFGMQNAKAMSTPLAPHFRLSG 1111
+++D+G K LG+EI RS+ + + Q+ Y ++ G+ K S P+ P S
Sbjct: 309 KLRDLGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSA 366
Query: 1112 KQSPTTTVEKDHMDRVPYASAVGSLMYAMVCTRPDILQAVSVVSRFMANPGKTHWEAVKW 1171
D +D Y +G LMY + TR DI AV+ +S+F P H +AV
Sbjct: 367 HSG------GDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMK 419
Query: 1172 VLRYLKGTVDTGLCFGGDT-CQVSGYVDSNYAGDLDRRRSTTGYVFRVHGAPVSWRSMLQ 1230
+L Y+KGTV GL + Q+ + D+++ D RRST GY + + +SW+S Q
Sbjct: 420 ILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQ 479
Query: 1231 STVALSTTEAEYMAMAEGVKEALWLWGLLDDLGIK-QECVDVWCDSQSAIHLTKNQVHHA 1289
V+ S+ EAEY A++ E +WL +L + + ++CD+ +AIH+ N V H
Sbjct: 480 QVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHE 539
Query: 1290 RTKHIDVRYHFVRD 1303
RTKHI+ H VR+
Sbjct: 540 RTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 326 bits (835), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 206/554 (37%), Positives = 297/554 (53%), Gaps = 51/554 (9%)
Query: 779 LQQQQQDVSVHTRPKRLYKPV-------------------QRLGSDK--PLRHYGQANLV 817
+Q + SVHT +R KP Q L +K PL H + LV
Sbjct: 22 IQNDVPEPSVHTSHRRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYH---SFLV 78
Query: 818 EYALSVEDDEPVTFKQAITAEESESWLVAMQEEMESLHKNQTWEVVPLPEGKSVIGCKWV 877
A + EP T+ +A +E W AM +E+ ++ TWE+ LP K IGCKWV
Sbjct: 79 CIA---KAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWV 132
Query: 878 YKKKEDSSEIKGT--RYKAILVAKGYAQKEGVDYNEIFSPIVKHTSIRVLLSIVAHSDLE 935
YK K +S GT RYKA LVAKGY Q+EG+D+ E FSP+ K TS++++L+I A +
Sbjct: 133 YKIKYNS---DGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFT 189
Query: 936 LEQLDVKTAFLHGDLEEEIYMAQPEGYKVEGKE----NQVCCLRKSLYGLKQSPRQWYKR 991
L QLD+ AFL+GDL+EEIYM P GY + N VC L+KS+YGLKQ+ RQW+ +
Sbjct: 190 LHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLK 249
Query: 992 FDFFMPEHGFRRSDYDCCVYIKKFREGDFIYLLLYVDDMLIASRSMVEIDKLKSQLSQEF 1051
F + GF +S D Y K F+ +L+YVDD++I S + +D+LKSQL F
Sbjct: 250 FSVTLIGFGFVQSHSD-HTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCF 308
Query: 1052 EMKDMGAAKKILGMEIKRERSSKKLYLSQKGYIERVVSRFGMQNAKAMSTPLAPHFRLSG 1111
+++D+G K LG+EI RS+ + + Q+ Y ++ G+ K S P+ P S
Sbjct: 309 KLRDLGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSA 366
Query: 1112 KQSPTTTVEKDHMDRVPYASAVGSLMYAMVCTRPDILQAVSVVSRFMANPGKTHWEAVKW 1171
D +D Y +G LMY + TR DI AV+ +S+F P H +AV
Sbjct: 367 HSG------GDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMK 419
Query: 1172 VLRYLKGTVDTGLCFGGDT-CQVSGYVDSNYAGDLDRRRSTTGYVFRVHGAPVSWRSMLQ 1230
+L Y+KGTV GL + Q+ + D+++ D RRST GY + + +SW+S Q
Sbjct: 420 ILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQ 479
Query: 1231 STVALSTTEAEYMAMAEGVKEALWLWGLLDDLGIK-QECVDVWCDSQSAIHLTKNQVHHA 1289
V+ S+ EAEY A++ E +WL +L + + ++CD+ +AIH+ N V H
Sbjct: 480 QVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHE 539
Query: 1290 RTKHIDVRYHFVRD 1303
RTKHI+ H VR+
Sbjct: 540 RTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 146 bits (368), Expect = 6e-39, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 131/235 (55%), Gaps = 11/235 (4%)
Query: 1021 IYLLLYVDDMLIASRSMVEIDKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLSQ 1080
+YLLLYVDD+L+ S ++ L QLS F MKD+G LG++IK S L+LSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 1081 KGYIERVVSRFGMQNAKAMSTPLAPHFRLSGKQSPTTTVEKDHMDRVPYASAVGSLMYAM 1140
Y E++++ GM + K MSTPL L S +T D D + S VG+L Y +
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLP----LKLNSSVSTAKYPDPSD---FRSIVGALQY-L 110
Query: 1141 VCTRPDILQAVSVVSRFMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQVSGYVDS 1199
TRPDI AV++V + M P ++ +K VLRY+KGT+ GL ++ V + DS
Sbjct: 111 TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDS 170
Query: 1200 NYAGDLDRRRSTTGYVFRVHGAPVSWRSMLQSTVALSTTEAEYMAMAEGVKEALW 1254
++AG RRSTTG+ + +SW + Q TV+ S+TE EY A+A E W
Sbjct: 171 DWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
ChrM:89617-90054 REVERSE LENGTH=145 | 201606
Length = 145
Score = 114 bits (286), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 77/119 (64%), Gaps = 3/119 (2%)
Query: 385 GSIKVVKGSLVVMRGTRYGNLYKLLGTTITGDVAVRINGRDPTACTRLWHMRLGHMSEKG 444
G +KV+KG +++G R+ +LY L G+ TG+ + +D T RLWH RL HMS++G
Sbjct: 27 GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAKDET---RLWHSRLAHMSQRG 83
Query: 445 LSLMCGKGLLKDMKKPCMEFCEHCVFGKAYRVPFSTSKHRSKEVLDYIHTDVWGPAKLP 503
+ L+ KG L K ++FCE C++GK +RV FST +H +K LDY+H+D+WG +P
Sbjct: 84 MELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWGAPSVP 142
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 91.7 bits (226), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 818 EYALSVEDDEPVTFKQAITAEESESWLVAMQEEMESLHKNQTWEVVPLPEGKSVIGCKWV 877
+Y+L++ K I A + W AMQEE+++L +N+TW +VP P ++++GCKWV
Sbjct: 15 KYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWV 74
Query: 878 YKKKEDSSEIKGT--RYKAILVAKGYAQKEGVDYNEIFSPIVKHTSIRVLLSI 928
+K K S GT R KA LVAKG+ Q+EG+ + E +SP+V+ +IR +L++
Sbjct: 75 FKTKLHSD---GTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV 124