BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0340.1
(219 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G33010.2 | glycine decarboxylase P-protein 1 | Chr4:15927133-... 163 4e-46
AT4G33010.1 | glycine decarboxylase P-protein 1 | Chr4:15926852-... 162 1e-45
AT2G26080.1 | glycine decarboxylase P-protein 2 | Chr2:11109330-... 156 1e-43
>AT4G33010.2 | glycine decarboxylase P-protein 1 |
Chr4:15927133-15931150 REVERSE LENGTH=976 | 201606
Length = 976
Score = 163 bits (413), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/198 (46%), Positives = 106/198 (53%), Gaps = 61/198 (30%)
Query: 1 MVAMYAVYHGPACLKTIVERVHGLAG-FEFGLKKLGTVEVQWELIFDTVKIKCVDAHAIA 59
M AMYAVYHGPA LK+I +RVHGLAG F GL KLG EVQ FDTVKIKC DAHAIA
Sbjct: 411 MAAMYAVYHGPAGLKSIAQRVHGLAGIFSLGLNKLGVAEVQELPFFDTVKIKCSDAHAIA 470
Query: 60 DVAYKSEMNLRIVDSNIVN--------------------------FTAASLAPEVENAIP 93
D A KSE+NLR+VDS + FTA SLAPEV+N+IP
Sbjct: 471 DAASKSEINLRVVDSTTITASFDETTTLDDVDKLFKVFASGKPVPFTAESLAPEVQNSIP 530
Query: 94 AGLVRANAYLPHPIFNSY------IIFV----------------------------EMMP 119
+ L R + YL HPIFN Y + ++ EMMP
Sbjct: 531 SSLTRESPYLTHPIFNMYHTEHELLRYIHKLQSKDLSLCHSMIPLGSCTMKLNATTEMMP 590
Query: 120 ATWPRFAAMHPFAPTEQA 137
TWP F +HPFAP EQA
Sbjct: 591 VTWPSFTDIHPFAPVEQA 608
>AT4G33010.1 | glycine decarboxylase P-protein 1 |
Chr4:15926852-15931150 REVERSE LENGTH=1037 | 201606
Length = 1037
Score = 162 bits (409), Expect = 1e-45, Method: Composition-based stats.
Identities = 93/198 (46%), Positives = 103/198 (52%), Gaps = 61/198 (30%)
Query: 1 MVAMYAVYHGPACLKTIVERVHGLAG-FEFGLKKLGTVEVQWELIFDTVKIKCVDAHAIA 59
M AMYAVYHGPA LK+I +RVHGLAG F GL KLG EVQ FDTVKIKC DAHAIA
Sbjct: 411 MAAMYAVYHGPAGLKSIAQRVHGLAGIFSLGLNKLGVAEVQELPFFDTVKIKCSDAHAIA 470
Query: 60 DVAYKSEMNLRIVDSNIVN--------------------------FTAASLAPEVENAIP 93
D A KSE+NLR+VDS + FTA SLAPEV+N+IP
Sbjct: 471 DAASKSEINLRVVDSTTITASFDETTTLDDVDKLFKVFASGKPVPFTAESLAPEVQNSIP 530
Query: 94 AGLVRANAYLPHPIFNSYII----------------------------------FVEMMP 119
+ L R + YL HPIFN Y EMMP
Sbjct: 531 SSLTRESPYLTHPIFNMYHTEHELLRYIHKLQSKDLSLCHSMIPLGSCTMKLNATTEMMP 590
Query: 120 ATWPRFAAMHPFAPTEQA 137
TWP F +HPFAP EQA
Sbjct: 591 VTWPSFTDIHPFAPVEQA 608
>AT2G26080.1 | glycine decarboxylase P-protein 2 |
Chr2:11109330-11113786 REVERSE LENGTH=1044 | 201606
Length = 1044
Score = 156 bits (394), Expect = 1e-43, Method: Composition-based stats.
Identities = 92/198 (46%), Positives = 100/198 (50%), Gaps = 61/198 (30%)
Query: 1 MVAMYAVYHGPACLKTIVERVHGLAG-FEFGLKKLGTVEVQWELIFDTVKIKCVDAHAIA 59
M AMYAVYHGP LK+I +RVHGLAG F GLKKLGT +VQ FDTVK+ C DA AI
Sbjct: 417 MTAMYAVYHGPEGLKSIAQRVHGLAGVFALGLKKLGTAQVQDLPFFDTVKVTCSDATAIF 476
Query: 60 DVAYKSEMNLRIVDSNI--------------------------VNFTAASLAPEVENAIP 93
DVA K E+NLR+VDSN V FTA SLAPE NAIP
Sbjct: 477 DVAAKKEINLRLVDSNTITVAFDETTTLDDVDKLFEVFASGKPVQFTAESLAPEFNNAIP 536
Query: 94 AGLVRANAYLPHPIFNSYII----------------------------------FVEMMP 119
+ L R + YL HPIFN Y EMMP
Sbjct: 537 SSLTRESPYLTHPIFNMYHTEHELLRYIHKLQNKDLSLCHSMIPLGSCTMKLNATTEMMP 596
Query: 120 ATWPRFAAMHPFAPTEQA 137
TWP F MHPFAP EQA
Sbjct: 597 VTWPSFTNMHPFAPVEQA 614