BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0360.1
(1433 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 313 1e-88
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 313 1e-88
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 135 3e-35
ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C... 118 2e-30
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 94 2e-21
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 313 bits (801), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 194/519 (37%), Positives = 281/519 (54%), Gaps = 58/519 (11%)
Query: 825 EPVTFKQAIAAAERESWLVAMQEEMESLHKNKTWEVVPLPEGKSVIGCKWVYKKKEDSSE 884
EP T+ +A E W AM +E+ ++ TWE+ LP K IGCKWVYK K +S
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNS-- 139
Query: 885 IKGT--RYKARLVAKGYAQKEVVDYNEIFSPVVKHTSIRVLLSIVAHSDLELEQLNVKTA 942
GT RYKARLVAKGY Q+E +D+ E FSPV K TS++++L+I A + L QL++ A
Sbjct: 140 -DGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNA 198
Query: 943 FLHGDLEEEIYMAQPEGYQVEGKE----NQVCRLRKSLYGLKQSPRQWYKRFDFFMLKHG 998
FL+GDL+EEIYM P GY + N VC L+KS+YGLKQ+ RQW+ +F ++ G
Sbjct: 199 FLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFG 258
Query: 999 FRRSDYDCCVYIKKLLEGDFIYLLLYVDDMLIASRSMVEIDKLKSQLSQEFEMKDMGAAK 1058
F +S D Y K+ F+ +L+YVDD++I S + +D+LKSQL F+++D+G K
Sbjct: 259 FVQSHSD-HTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLK 317
Query: 1059 KILGMEIKRERSSKKLYLNQKGYIERVVSRFGMQNAKAVSTPVALMRHENVPSESLNLDE 1118
LG+EI RS+ + + Q+ Y ++ G+ K S P +D
Sbjct: 318 YFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVP---------------MDP 360
Query: 1119 LVSLEQLLSRITLFYVQAPHFRLSGKQSPTTTVEKDHMDRVPYASAVGSLMYAMVCTRPD 1178
V+ + H SG D +D Y +G LMY + TR D
Sbjct: 361 SVTF-------------SAH---SG---------GDFVDAKAYRRLIGRLMYLQI-TRLD 394
Query: 1179 ISQAVSVVSRFMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQVSGYVDSDYAGDL 1237
IS AV+ +S+F P H +AV +L Y+KGTV GL + Q+ + D+ +
Sbjct: 395 ISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCK 454
Query: 1238 DRRRSTTGYVFRVHGAPVSWRSMLQSTVALSTTEAEYMAMAEGVKEALWLWGLLDDLGIK 1297
D RRST GY + + +SW+S Q V+ S+ EAEY A++ E +WL +L +
Sbjct: 455 DTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLP 514
Query: 1298 -QECVDVWCDSQSAIHLAKNQVHHARTKHIDVRYHFVRD 1335
+ ++CD+ +AIH+A N V H RTKHI+ H VR+
Sbjct: 515 LSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 313 bits (801), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 194/519 (37%), Positives = 281/519 (54%), Gaps = 58/519 (11%)
Query: 825 EPVTFKQAIAAAERESWLVAMQEEMESLHKNKTWEVVPLPEGKSVIGCKWVYKKKEDSSE 884
EP T+ +A E W AM +E+ ++ TWE+ LP K IGCKWVYK K +S
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNS-- 139
Query: 885 IKGT--RYKARLVAKGYAQKEVVDYNEIFSPVVKHTSIRVLLSIVAHSDLELEQLNVKTA 942
GT RYKARLVAKGY Q+E +D+ E FSPV K TS++++L+I A + L QL++ A
Sbjct: 140 -DGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNA 198
Query: 943 FLHGDLEEEIYMAQPEGYQVEGKE----NQVCRLRKSLYGLKQSPRQWYKRFDFFMLKHG 998
FL+GDL+EEIYM P GY + N VC L+KS+YGLKQ+ RQW+ +F ++ G
Sbjct: 199 FLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFG 258
Query: 999 FRRSDYDCCVYIKKLLEGDFIYLLLYVDDMLIASRSMVEIDKLKSQLSQEFEMKDMGAAK 1058
F +S D Y K+ F+ +L+YVDD++I S + +D+LKSQL F+++D+G K
Sbjct: 259 FVQSHSD-HTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLK 317
Query: 1059 KILGMEIKRERSSKKLYLNQKGYIERVVSRFGMQNAKAVSTPVALMRHENVPSESLNLDE 1118
LG+EI RS+ + + Q+ Y ++ G+ K S P +D
Sbjct: 318 YFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVP---------------MDP 360
Query: 1119 LVSLEQLLSRITLFYVQAPHFRLSGKQSPTTTVEKDHMDRVPYASAVGSLMYAMVCTRPD 1178
V+ + H SG D +D Y +G LMY + TR D
Sbjct: 361 SVTF-------------SAH---SG---------GDFVDAKAYRRLIGRLMYLQI-TRLD 394
Query: 1179 ISQAVSVVSRFMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQVSGYVDSDYAGDL 1237
IS AV+ +S+F P H +AV +L Y+KGTV GL + Q+ + D+ +
Sbjct: 395 ISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCK 454
Query: 1238 DRRRSTTGYVFRVHGAPVSWRSMLQSTVALSTTEAEYMAMAEGVKEALWLWGLLDDLGIK 1297
D RRST GY + + +SW+S Q V+ S+ EAEY A++ E +WL +L +
Sbjct: 455 DTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLP 514
Query: 1298 -QECVDVWCDSQSAIHLAKNQVHHARTKHIDVRYHFVRD 1335
+ ++CD+ +AIH+A N V H RTKHI+ H VR+
Sbjct: 515 LSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 135 bits (340), Expect = 3e-35, Method: Composition-based stats.
Identities = 92/269 (34%), Positives = 133/269 (49%), Gaps = 45/269 (16%)
Query: 1019 IYLLLYVDDMLIASRSMVEIDKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLNQ 1078
+YLLLYVDD+L+ S ++ L QLS F MKD+G LG++IK S L+L+Q
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 1079 KGYIERVVSRFGMQNAKAVSTPVALMRHENVPSESLNLDELVSLEQLLSRITLFYVQAPH 1138
Y E++++ GM + K +STP+ L + +V + Y
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAK-------------------YPDPSD 99
Query: 1139 FRLSGKQSPTTTVEKDHMDRVPYASAVGSLMYAMVCTRPDISQAVSVVSRFMANPGKTHW 1198
FR S VG+L Y + TRPDIS AV++V + M P +
Sbjct: 100 FR----------------------SIVGALQY-LTLTRPDISYAVNIVCQRMHEPTLADF 136
Query: 1199 EAVKWVLRYLKGTVDTGLCFGGDT-CQVSGYVDSDYAGDLDRRRSTTGYVFRVHGAPVSW 1257
+ +K VLRY+KGT+ GL ++ V + DSD+AG RRSTTG+ + +SW
Sbjct: 137 DLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISW 196
Query: 1258 RSMLQSTVALSTTEAEYMAMAEGVKEALW 1286
+ Q TV+ S+TE EY A+A E W
Sbjct: 197 SAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
ChrM:89617-90054 REVERSE LENGTH=145 | 201606
Length = 145
Score = 118 bits (296), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 78/119 (65%), Gaps = 3/119 (2%)
Query: 383 GSIRVVKGSLVVMRGTRYGNLYKLLGTTITGDVAVGISGRDPTASTRLWHMRLGHMSEKG 442
G ++V+KG +++G R+ +LY L G+ TG+ + + +D TRLWH RL HMS++G
Sbjct: 27 GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAKD---ETRLWHSRLAHMSQRG 83
Query: 443 LSLMCGKGLLKDMKKPCMEFCEHCVFGKAHRVTFSTSKHRSKEVLDYVHTDVWGPAKLP 501
+ L+ KG L K ++FCE C++GK HRV FST +H +K LDYVH+D+WG +P
Sbjct: 84 MELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWGAPSVP 142
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 93.6 bits (231), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 816 EYALSVEDDEPVTFKQAIAAAERESWLVAMQEEMESLHKNKTWEVVPLPEGKSVIGCKWV 875
+Y+L++ K I A + W AMQEE+++L +NKTW +VP P ++++GCKWV
Sbjct: 15 KYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWV 74
Query: 876 YKKKEDSSEIKGT--RYKARLVAKGYAQKEVVDYNEIFSPVVKHTSIRVLLSI 926
+K K S GT R KARLVAKG+ Q+E + + E +SPVV+ +IR +L++
Sbjct: 75 FKTKLHSD---GTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV 124