BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0400.1
(355 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G42170.1 | BED zinc finger and hAT dimerization domain-contai... 73 1e-13
AT3G42170.2 | BED zinc finger and hAT dimerization domain-contai... 72 1e-13
AT4G00170.2 | Plant VAMP (vesicle-associated membrane protein) f... 49 1e-06
AT4G00170.1 | Plant VAMP (vesicle-associated membrane protein) f... 50 1e-06
AT3G60600.1 | vesicle associated protein | Chr3:22400537-2240240... 47 1e-05
>AT3G42170.1 | BED zinc finger and hAT dimerization
domain-containing protein DAYSLEEPER |
Chr3:14321838-14323928 FORWARD LENGTH=696 | 201606
Length = 696
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 45/240 (18%)
Query: 2 LCKFSKPFCEATTLFSGVEYVTLNPVLEYLVDIGMVFHD---NQSNL---------LFPE 49
LC F KP EA + T NP FH+ QS+L
Sbjct: 441 LCTFLKPLFEAVSTLQS----TGNP------SAVTFFHEVWKTQSDLSRAIAGEDPFVTG 490
Query: 50 ITLSMESKFTKYWGENPVLFGVACILDPRIKMK--------------------VDMVLSE 89
I +M+ K KYW + ++ +A ++DPR KMK VD + E
Sbjct: 491 IAKTMQEKVDKYWRDCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKNIKTVDDGIHE 550
Query: 90 LENCFLSSVCAIKC-SLSQSATMVSKLRESFAKEPLATASEEMSRYDSEPGLLVDDLEKF 148
L +++ S A +S + E+ +Y E L+ +++F
Sbjct: 551 LFTEYMALPSPQNTTSEGGKADGLSDFDTYIMETTGQNLKSELDQYLDE--TLLPRVQEF 608
Query: 149 NVLGWWSENEKRCPFLSRIARDVLVVTVSTVASESAFSLEKRILGDYRSTLTSEMLERLV 208
+VL WW +N+ + P LS++ARD+L + VS A + F +E R + +Y+++L E +E L+
Sbjct: 609 DVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALI 668
>AT3G42170.2 | BED zinc finger and hAT dimerization
domain-containing protein DAYSLEEPER |
Chr3:14321838-14323928 FORWARD LENGTH=674 | 201606
Length = 674
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 45/240 (18%)
Query: 2 LCKFSKPFCEATTLFSGVEYVTLNPVLEYLVDIGMVFHD---NQSNL---------LFPE 49
LC F KP EA + T NP FH+ QS+L
Sbjct: 419 LCTFLKPLFEAVSTLQS----TGNP------SAVTFFHEVWKTQSDLSRAIAGEDPFVTG 468
Query: 50 ITLSMESKFTKYWGENPVLFGVACILDPRIKMK--------------------VDMVLSE 89
I +M+ K KYW + ++ +A ++DPR KMK VD + E
Sbjct: 469 IAKTMQEKVDKYWRDCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKNIKTVDDGIHE 528
Query: 90 LENCFLSSVCAIKC-SLSQSATMVSKLRESFAKEPLATASEEMSRYDSEPGLLVDDLEKF 148
L +++ S A +S + E+ +Y E L+ +++F
Sbjct: 529 LFTEYMALPSPQNTTSEGGKADGLSDFDTYIMETTGQNLKSELDQYLDE--TLLPRVQEF 586
Query: 149 NVLGWWSENEKRCPFLSRIARDVLVVTVSTVASESAFSLEKRILGDYRSTLTSEMLERLV 208
+VL WW +N+ + P LS++ARD+L + VS A + F +E R + +Y+++L E +E L+
Sbjct: 587 DVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALI 646
>AT4G00170.2 | Plant VAMP (vesicle-associated membrane protein)
family protein | Chr4:70732-71864 REVERSE LENGTH=212 |
201606
Length = 212
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 200 TSEMLERLVKTTNPKEDLGLKGTGTIWPGSTHNFKVNVEGYGYS--DMKSKDTLILQDV- 256
T++ + VKTTNP++ TG + PG + N V ++ + DM+ KD ++Q V
Sbjct: 8 TTQCVAFKVKTTNPRKYCVRPNTGVVLPGDSCNVTVTMQAQKEAPLDMQCKDKFLVQTVV 67
Query: 257 --SEPKLPNVVASTDIPEVPRSLEEPKEKSSEVPRSLDKPKEKPSKALSKTIAKL---TK 311
V+A E R +E+ K + +P + P + S+ + +A L
Sbjct: 68 VSDGTTSKEVLAEMFNKEAGRVIEDFKLRVVYIPANPPSPVPEGSEEGNSPMASLNDIAS 127
Query: 312 ENKSVIQQNEKLRQEL-----ELYVMVSKLTEEKSSIIQGNQKLDLEL 354
++ S+ + +E E + M+SKLTEEK+S Q +QKL LEL
Sbjct: 128 QSASLFDDVSRTFEETSEKSSEAWSMISKLTEEKTSATQQSQKLRLEL 175
>AT4G00170.1 | Plant VAMP (vesicle-associated membrane protein)
family protein | Chr4:70732-72085 REVERSE LENGTH=239 |
201606
Length = 239
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 200 TSEMLERLVKTTNPKEDLGLKGTGTIWPGSTHNFKVNVEGYGYS--DMKSKDTLILQDV- 256
T++ + VKTTNP++ TG + PG + N V ++ + DM+ KD ++Q V
Sbjct: 35 TTQCVAFKVKTTNPRKYCVRPNTGVVLPGDSCNVTVTMQAQKEAPLDMQCKDKFLVQTVV 94
Query: 257 --SEPKLPNVVASTDIPEVPRSLEEPKEKSSEVPRSLDKPKEKPSKALSKTIAKL---TK 311
V+A E R +E+ K + +P + P + S+ + +A L
Sbjct: 95 VSDGTTSKEVLAEMFNKEAGRVIEDFKLRVVYIPANPPSPVPEGSEEGNSPMASLNDIAS 154
Query: 312 ENKSVIQQNEKLRQEL-----ELYVMVSKLTEEKSSIIQGNQKLDLEL 354
++ S+ + +E E + M+SKLTEEK+S Q +QKL LEL
Sbjct: 155 QSASLFDDVSRTFEETSEKSSEAWSMISKLTEEKTSATQQSQKLRLEL 202
>AT3G60600.1 | vesicle associated protein | Chr3:22400537-22402408
FORWARD LENGTH=256 | 201606
Length = 256
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 90/205 (43%), Gaps = 30/205 (14%)
Query: 173 VVTVSTVASESAFSLEKRILGD-YRSTLTSEMLERLVKTTNPKEDLGLKGTGTIWPGSTH 231
++TV + + F L+K+I Y + T + VKTTNPK+ TG + P ST
Sbjct: 22 LLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRSTC 81
Query: 232 NFKVNVEGY--GYSDMKSKDTLILQDVSEPKLPNVVASTDIPEV-----PRSLEEPKEKS 284
V ++ SDM+ KD +LQ V P V A PE+ +EE K +
Sbjct: 82 EVLVTMQAQKEAPSDMQCKDKFLLQGVIAS--PGVTAKEVTPEMFSKEAGHRVEETKLRV 139
Query: 285 SEV--PRSLDKPKE------KPSKALSK-------TIAKLTKENKSVIQQNEKLRQELEL 329
+ V PR E P ++S + + +NK+ Q+N E
Sbjct: 140 TYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFERFIVDNKAGHQENTS-----EA 194
Query: 330 YVMVSKLTEEKSSIIQGNQKLDLEL 354
+++KLTEEK S IQ N +L EL
Sbjct: 195 RALITKLTEEKQSAIQLNNRLQREL 219