BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0430.1
(518 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 328 e-101
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 328 e-101
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 110 2e-27
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 85 6e-19
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 328 bits (842), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/467 (37%), Positives = 261/467 (55%), Gaps = 15/467 (3%)
Query: 9 WLGAMKSEMESMSENQVWNLVDLPDGVKPIGCKWIFKMKTDKDGNVSVFKARLVAKGYRQ 68
W GAM E+ +M W + LP KPIGCKW++K+K + DG + +KARLVAKGY Q
Sbjct: 98 WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQ 157
Query: 69 VQDIDYEETFSPVAMLKSIRIILAIAAHYDYDIWQMDVKTAFLNGKLEEDVYMTQPEGFE 128
+ ID+ ETFSPV L S+++ILAI+A Y++ + Q+D+ AFLNG L+E++YM P G+
Sbjct: 158 QEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYA 217
Query: 129 ----DSENAGKVCKLQRSIYGLKQASRSWNLRFDEKIKEFGFLKNEEESCVYKKVSGSNL 184
DS VC L++SIYGLKQASR W L+F + FGF+++ + + K++ +
Sbjct: 218 ARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLF 277
Query: 185 VFLVLYVDDILIVGNDIPMLDSVKEWLRKCFSMKDLGDAEYILGIKIYRDRSRRMIGLSQ 244
+ +++YVDDI+I N+ +D +K L+ CF ++DLG +Y LG++I RS I + Q
Sbjct: 278 LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI--ARSAAGINICQ 335
Query: 245 ETYIDKVLGRFKMEDSKRGFLPMTHGTTLSKTQCPRNPDELAHMKKVPYASAIGSIMYAM 304
Y +L + K +PM T S D A Y IG +MY
Sbjct: 336 RKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA------YRRLIGRLMYLQ 389
Query: 305 VCTRPDVSYALSMCSRYQSNPGEKHWTAAKNILKYLRRTKDHFLVYGGKDELIAEGHVDA 364
+ TR D+S+A++ S++ P H A IL Y++ T L Y + E+ + DA
Sbjct: 390 I-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDA 448
Query: 365 SFQTDRDDFQSQSGYVFCLNGGAVSWKSSKQTTVADSTTEAEYLAASEAAKEGVWIKKFI 424
SFQ+ +D +S +GY L +SWKS KQ V+ S+ EAEY A S A E +W+ +F
Sbjct: 449 SFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFF 508
Query: 425 SEFGVVPSIENGVTLYCDNNGAIAQAKELRAHQKSKHILRKYHVIRE 471
E + + L+CDN AI A H+++KHI H +RE
Sbjct: 509 RELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 328 bits (842), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/467 (37%), Positives = 261/467 (55%), Gaps = 15/467 (3%)
Query: 9 WLGAMKSEMESMSENQVWNLVDLPDGVKPIGCKWIFKMKTDKDGNVSVFKARLVAKGYRQ 68
W GAM E+ +M W + LP KPIGCKW++K+K + DG + +KARLVAKGY Q
Sbjct: 98 WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQ 157
Query: 69 VQDIDYEETFSPVAMLKSIRIILAIAAHYDYDIWQMDVKTAFLNGKLEEDVYMTQPEGFE 128
+ ID+ ETFSPV L S+++ILAI+A Y++ + Q+D+ AFLNG L+E++YM P G+
Sbjct: 158 QEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYA 217
Query: 129 ----DSENAGKVCKLQRSIYGLKQASRSWNLRFDEKIKEFGFLKNEEESCVYKKVSGSNL 184
DS VC L++SIYGLKQASR W L+F + FGF+++ + + K++ +
Sbjct: 218 ARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLF 277
Query: 185 VFLVLYVDDILIVGNDIPMLDSVKEWLRKCFSMKDLGDAEYILGIKIYRDRSRRMIGLSQ 244
+ +++YVDDI+I N+ +D +K L+ CF ++DLG +Y LG++I RS I + Q
Sbjct: 278 LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI--ARSAAGINICQ 335
Query: 245 ETYIDKVLGRFKMEDSKRGFLPMTHGTTLSKTQCPRNPDELAHMKKVPYASAIGSIMYAM 304
Y +L + K +PM T S D A Y IG +MY
Sbjct: 336 RKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA------YRRLIGRLMYLQ 389
Query: 305 VCTRPDVSYALSMCSRYQSNPGEKHWTAAKNILKYLRRTKDHFLVYGGKDELIAEGHVDA 364
+ TR D+S+A++ S++ P H A IL Y++ T L Y + E+ + DA
Sbjct: 390 I-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDA 448
Query: 365 SFQTDRDDFQSQSGYVFCLNGGAVSWKSSKQTTVADSTTEAEYLAASEAAKEGVWIKKFI 424
SFQ+ +D +S +GY L +SWKS KQ V+ S+ EAEY A S A E +W+ +F
Sbjct: 449 SFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFF 508
Query: 425 SEFGVVPSIENGVTLYCDNNGAIAQAKELRAHQKSKHILRKYHVIRE 471
E + + L+CDN AI A H+++KHI H +RE
Sbjct: 509 RELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 110 bits (275), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 14/237 (5%)
Query: 185 VFLVLYVDDILIVGNDIPMLDSVKEWLRKCFSMKDLGDAEYILGIKIYRDRSRRMIGLSQ 244
++L+LYVDDIL+ G+ +L+ + L FSMKDLG Y LGI+I S + LSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 245 ETYIDKVLGRFKMEDSK--RGFLPMTHGTTLSKTQCPRNPDELAHMKKVPYASAIGSIMY 302
Y +++L M D K LP+ +++S + P D + S +G++ Y
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSD---------FRSIVGALQY 109
Query: 303 AMVCTRPDVSYALSMCSRYQSNPGEKHWTAAKNILKYLRRTKDHFLVYGGKDELIAEGHV 362
+ TRPD+SYA+++ + P + K +L+Y++ T H L +L +
Sbjct: 110 -LTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFC 168
Query: 363 DASFQTDRDDFQSQSGYVFCLNGGAVSWKSSKQTTVADSTTEAEYLAASEAAKEGVW 419
D+ + +S +G+ L +SW + +Q TV+ S+TE EY A + A E W
Sbjct: 169 DSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 84.7 bits (208), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%)
Query: 9 WLGAMKSEMESMSENQVWNLVDLPDGVKPIGCKWIFKMKTDKDGNVSVFKARLVAKGYRQ 68
W AM+ E++++S N+ W LV P +GCKW+FK K DG + KARLVAKG+ Q
Sbjct: 40 WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQ 99
Query: 69 VQDIDYEETFSPVAMLKSIRIILAIAAHYD 98
+ I + ET+SPV +IR IL +A +
Sbjct: 100 EEGIYFVETYSPVVRTATIRTILNVAQQLE 129