BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0440.1
(538 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 65 1e-12
ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C... 53 3e-08
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 65.1 bits (157), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 336 NRTLMDMVRSMMNLADLPNTFWGYALETAAFTLNRAPSKAVE-KTPYEIWTGKVPKLSFL 394
NRT+++ VRSM+ LP TF A TA +N+ PS A+ P E+W VP S+L
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 395 KVWGCDVYVKRLQGDKLAPRSDKCLFIGYPKETKGYYFYN 434
+ +GC Y+ +G KL PR+ K E KG Y N
Sbjct: 62 RRFGCVAYIHCDEG-KLKPRAKK-------GEEKGSYLIN 93
>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
ChrM:89617-90054 REVERSE LENGTH=145 | 201606
Length = 145
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 167 NQSYLWHCRLGHINMKRMQKLHADGLLGSCDLESYDTCEPCLVGKMTRSSFKGKGDRVSE 226
+++ LWH RL H++ + M+ L G L S + S CE C+ GK R +F
Sbjct: 67 DETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKN 126
Query: 227 PLELIHTDVCGPMS 240
PL+ +H+D+ G S
Sbjct: 127 PLDYVHSDLWGAPS 140