BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0460.1
(125 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G47570.1 | NADH dehydrogenase ubiquinone 1 beta subcomplex su... 197 2e-66
>AT5G47570.1 | NADH dehydrogenase ubiquinone 1 beta subcomplex
subunit | Chr5:19292869-19294666 REVERSE LENGTH=125 |
201606
Length = 125
Score = 197 bits (500), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 106/125 (84%), Positives = 114/125 (91%)
Query: 1 MAGKLSNVASQIMGGNGVIGRSIASSLRLRAGMGMPVGKHIVPDKPLPVNDELVWDNGTS 60
MAG+LS VAS+IMGGNGV+ RS+ SSLR RAGMG+PVGKHIVPDKPL VNDEL+WDNGT+
Sbjct: 1 MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60
Query: 61 LPEPCIDRIADTVGKYEALAWLCGGLSFFGGLGLLAVWNDKASKYPFTPKVYPYDNLRVE 120
PEPCIDRIADTVGKYEALAWL GGL FF GLGLLAV NDKASK PFTP+VYPYDNLRVE
Sbjct: 61 FPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120
Query: 121 LGGEP 125
LGGEP
Sbjct: 121 LGGEP 125