BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0470.1
(146 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G19260.1 | TTF-type zinc finger protein with HAT dimerization... 123 4e-33
AT3G29765.1 | General transcription factor 2-related zinc finger... 114 4e-30
AT2G06541.2 | TTF-type zinc finger protein with HAT dimerization... 101 1e-25
AT2G06541.1 | TTF-type zinc finger protein with HAT dimerization... 101 2e-25
AT1G41920.1 | General transcription factor 2-related zinc finger... 69 3e-14
>AT1G19260.1 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr1:6657260-6659569 REVERSE
LENGTH=769 | 201606
Length = 769
Score = 123 bits (308), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 96/172 (55%), Gaps = 27/172 (15%)
Query: 1 MKELGDRFTLQNVELLNCVACSNPCSSFQDFDLDSLLGLARFYPNDFKHVSDKELSSQLE 60
++E DRF N ELL C++ +P SF+ FD L+ L FYP+DF V + L QLE
Sbjct: 598 LQEFNDRFDEVNSELLICMSSLSPIDSFRQFDKSMLVRLTEFYPDDFSFVERRSLDHQLE 657
Query: 61 TYTECVKTDDNFSNLKALS---------------------------LSVATASLERVFSV 93
Y + VK D+ F++LK L L VATA++ER FS
Sbjct: 658 IYLDNVKNDERFTDLKCLGDLARVMVETRKHLSHPLVYRLLKVSLILPVATATVERCFSA 717
Query: 94 MKYVKNELRNRISNPWLNVCLVTFVEKDMFATIDDEDIIKRFQAMSKRRMNL 145
M +VK LRNRI + +L+ CLV F+EK T+ +E +IKRFQ MS+RR++L
Sbjct: 718 MNFVKTTLRNRIGDMFLSDCLVCFIEKQALNTVTNESVIKRFQDMSERRVHL 769
>AT3G29765.1 | General transcription factor 2-related zinc finger
protein | Chr3:11595467-11597077 REVERSE LENGTH=536 |
201606
Length = 536
Score = 114 bits (284), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 94/172 (54%), Gaps = 27/172 (15%)
Query: 1 MKELGDRFTLQNVELLNCVACSNPCSSFQDFDLDSLLGLARFYPNDFKHVSDKELSSQLE 60
++E D F N ELL C++ +P SF+ FD L+ L FYP+DF V + L QLE
Sbjct: 365 LQEFNDCFDELNSELLICMSSLSPIDSFRQFDKSMLVRLTEFYPDDFSFVERRSLDHQLE 424
Query: 61 TYTECVKTDDNFSNLKALS---------------------------LSVATASLERVFSV 93
Y + VK D+ F++L+ L L VATA++ R FS
Sbjct: 425 IYLDNVKNDERFTDLEHLGDLARVMVETRKHLSHPLVYRLLKLSLILPVATATVVRCFSA 484
Query: 94 MKYVKNELRNRISNPWLNVCLVTFVEKDMFATIDDEDIIKRFQAMSKRRMNL 145
M +VK LRNR + +L+ CLV F+EK + T+ +E +IKRFQ MS+RR++L
Sbjct: 485 MNFVKTTLRNRFGDVFLSDCLVCFIEKQVLNTVTNESVIKRFQDMSERRVHL 536
>AT2G06541.2 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr2:2598222-2600326 REVERSE
LENGTH=564 | 201606
Length = 564
Score = 101 bits (251), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 91/170 (53%), Gaps = 28/170 (16%)
Query: 3 ELGDRFTLQNVELLNCVACSNPCSSFQDFDLDSLLGLARFYPNDFKHVSDKELSSQLETY 62
E D F N ELL CVA +P F++FD ++ LA FYP DF V + L QL Y
Sbjct: 396 EYNDCFDEVNTELLGCVASLSPTDLFREFDQLKVMRLAEFYPQDFTRVDWRSLEHQLGLY 455
Query: 63 TECVKTDDNFSNLKA---------------------------LSLSVATASLERVFSVMK 95
+ ++ DD F+NLK+ L+L +ATA++ER FS
Sbjct: 456 IDNIREDDRFANLKSLGDLARVMIETRKHLSHPQVYRLLKVVLTLPIATATVERCFSAT- 514
Query: 96 YVKNELRNRISNPWLNVCLVTFVEKDMFATIDDEDIIKRFQAMSKRRMNL 145
VK LRNRIS+ +LN +V V++++F T+ ++ +IKRFQ+M R + L
Sbjct: 515 VVKTTLRNRISDQFLNDYVVCLVKRELFDTVINKVVIKRFQSMENRMIAL 564
>AT2G06541.1 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr2:2598222-2600326 REVERSE
LENGTH=592 | 201606
Length = 592
Score = 101 bits (251), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 91/170 (53%), Gaps = 28/170 (16%)
Query: 3 ELGDRFTLQNVELLNCVACSNPCSSFQDFDLDSLLGLARFYPNDFKHVSDKELSSQLETY 62
E D F N ELL CVA +P F++FD ++ LA FYP DF V + L QL Y
Sbjct: 424 EYNDCFDEVNTELLGCVASLSPTDLFREFDQLKVMRLAEFYPQDFTRVDWRSLEHQLGLY 483
Query: 63 TECVKTDDNFSNLKA---------------------------LSLSVATASLERVFSVMK 95
+ ++ DD F+NLK+ L+L +ATA++ER FS
Sbjct: 484 IDNIREDDRFANLKSLGDLARVMIETRKHLSHPQVYRLLKVVLTLPIATATVERCFSAT- 542
Query: 96 YVKNELRNRISNPWLNVCLVTFVEKDMFATIDDEDIIKRFQAMSKRRMNL 145
VK LRNRIS+ +LN +V V++++F T+ ++ +IKRFQ+M R + L
Sbjct: 543 VVKTTLRNRISDQFLNDYVVCLVKRELFDTVINKVVIKRFQSMENRMIAL 592
>AT1G41920.1 | General transcription factor 2-related zinc finger
protein | Chr1:15680978-15684487 REVERSE LENGTH=496 |
201606
Length = 496
Score = 69.3 bits (168), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%)
Query: 1 MKELGDRFTLQNVELLNCVACSNPCSSFQDFDLDSLLGLARFYPNDFKHVSDKELSSQLE 60
++E DRF N ELL+CVA +P SF +FD +L L+ FYP DF HV + L QL
Sbjct: 423 IQEFNDRFDEVNTELLSCVASLSPIDSFHEFDQLKVLRLSEFYPQDFTHVDRRSLEHQLG 482
Query: 61 TYTECVKTDDNFSN 74
Y + ++ D+ F+N
Sbjct: 483 LYIDNIREDERFAN 496