BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0560.1
(111 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G16520.2 | Ubiquitin-like superfamily protein | Chr4:9306882-... 136 8e-43
AT4G16520.1 | Ubiquitin-like superfamily protein | Chr4:9306882-... 136 8e-43
AT4G16520.3 | Ubiquitin-like superfamily protein | Chr4:9306882-... 136 1e-42
AT2G45170.2 | AUTOPHAGY 8E | Chr2:18624545-18625526 FORWARD LENG... 135 2e-42
AT2G45170.1 | AUTOPHAGY 8E | Chr2:18624545-18625526 FORWARD LENG... 135 2e-42
>AT4G16520.2 | Ubiquitin-like superfamily protein |
Chr4:9306882-9308113 REVERSE LENGTH=121 | 201606
Length = 121
Score = 136 bits (343), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 63/70 (90%), Positives = 69/70 (98%)
Query: 42 RYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDDVLPPTGAIMSSIYEDKKDEDGFLYV 101
+YLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD+VLPP GA+MSS+YE+KKD+DGFLYV
Sbjct: 49 KYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYV 108
Query: 102 TYSGENTFGF 111
TYSGENTFGF
Sbjct: 109 TYSGENTFGF 118
>AT4G16520.1 | Ubiquitin-like superfamily protein |
Chr4:9306882-9308113 REVERSE LENGTH=121 | 201606
Length = 121
Score = 136 bits (343), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 63/70 (90%), Positives = 69/70 (98%)
Query: 42 RYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDDVLPPTGAIMSSIYEDKKDEDGFLYV 101
+YLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD+VLPP GA+MSS+YE+KKD+DGFLYV
Sbjct: 49 KYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYV 108
Query: 102 TYSGENTFGF 111
TYSGENTFGF
Sbjct: 109 TYSGENTFGF 118
>AT4G16520.3 | Ubiquitin-like superfamily protein |
Chr4:9306882-9307489 REVERSE LENGTH=121 | 201606
Length = 121
Score = 136 bits (342), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 63/70 (90%), Positives = 69/70 (98%)
Query: 42 RYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDDVLPPTGAIMSSIYEDKKDEDGFLYV 101
+YLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD+VLPP GA+MSS+YE+KKD+DGFLYV
Sbjct: 49 KYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYV 108
Query: 102 TYSGENTFGF 111
TYSGENTFGF
Sbjct: 109 TYSGENTFGF 118
>AT2G45170.2 | AUTOPHAGY 8E | Chr2:18624545-18625526 FORWARD
LENGTH=122 | 201606
Length = 122
Score = 135 bits (340), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 62/69 (89%), Positives = 68/69 (98%)
Query: 42 RYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDDVLPPTGAIMSSIYEDKKDEDGFLYV 101
+YLVP+DLTVGQFVYVIRKRIKLSAEKAIFIFVD+VLPPTG +MSS+YEDKKDEDGFLY+
Sbjct: 50 KYLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYI 109
Query: 102 TYSGENTFG 110
TYSGENTFG
Sbjct: 110 TYSGENTFG 118
>AT2G45170.1 | AUTOPHAGY 8E | Chr2:18624545-18625526 FORWARD
LENGTH=122 | 201606
Length = 122
Score = 135 bits (340), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 62/69 (89%), Positives = 68/69 (98%)
Query: 42 RYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDDVLPPTGAIMSSIYEDKKDEDGFLYV 101
+YLVP+DLTVGQFVYVIRKRIKLSAEKAIFIFVD+VLPPTG +MSS+YEDKKDEDGFLY+
Sbjct: 50 KYLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYI 109
Query: 102 TYSGENTFG 110
TYSGENTFG
Sbjct: 110 TYSGENTFG 118