BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0590.1
(118 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G16520.2 | Ubiquitin-like superfamily protein | Chr4:9306882-... 219 3e-75
AT4G16520.1 | Ubiquitin-like superfamily protein | Chr4:9306882-... 219 3e-75
AT2G45170.2 | AUTOPHAGY 8E | Chr2:18624545-18625526 FORWARD LENG... 207 2e-70
AT2G45170.1 | AUTOPHAGY 8E | Chr2:18624545-18625526 FORWARD LENG... 207 2e-70
AT3G60640.1 | Ubiquitin-like superfamily protein | Chr3:22416118... 206 3e-70
>AT4G16520.2 | Ubiquitin-like superfamily protein |
Chr4:9306882-9308113 REVERSE LENGTH=121 | 201606
Length = 121
Score = 219 bits (557), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 105/118 (88%), Positives = 114/118 (96%)
Query: 1 MTRSYFKQEHDLEKRKAEAARIREKYPDRVPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60
M +S FKQEHDLEKR+AEAARIREKYPDR+PVIVEKAE+SDIP IDKKKYLVPADLTVGQ
Sbjct: 1 MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQ 60
Query: 61 FVYVIRKRIKLSAEKAIFIFVDDVLPPTGAIMSSIYEDKKDEDGFLYVTYSGENTFGF 118
FVYVIRKRIKLSAEKAIFIFVD+VLPP GA+MSS+YE+KKD+DGFLYVTYSGENTFGF
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGF 118
>AT4G16520.1 | Ubiquitin-like superfamily protein |
Chr4:9306882-9308113 REVERSE LENGTH=121 | 201606
Length = 121
Score = 219 bits (557), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 105/118 (88%), Positives = 114/118 (96%)
Query: 1 MTRSYFKQEHDLEKRKAEAARIREKYPDRVPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60
M +S FKQEHDLEKR+AEAARIREKYPDR+PVIVEKAE+SDIP IDKKKYLVPADLTVGQ
Sbjct: 1 MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQ 60
Query: 61 FVYVIRKRIKLSAEKAIFIFVDDVLPPTGAIMSSIYEDKKDEDGFLYVTYSGENTFGF 118
FVYVIRKRIKLSAEKAIFIFVD+VLPP GA+MSS+YE+KKD+DGFLYVTYSGENTFGF
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGF 118
>AT2G45170.2 | AUTOPHAGY 8E | Chr2:18624545-18625526 FORWARD
LENGTH=122 | 201606
Length = 122
Score = 207 bits (526), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 98/114 (85%), Positives = 109/114 (95%)
Query: 4 SYFKQEHDLEKRKAEAARIREKYPDRVPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVY 63
S FK ++D EKRKAEA RIREKYPDR+PVIVEKAE+S++PNIDKKKYLVP+DLTVGQFVY
Sbjct: 5 SIFKMDNDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVY 64
Query: 64 VIRKRIKLSAEKAIFIFVDDVLPPTGAIMSSIYEDKKDEDGFLYVTYSGENTFG 117
VIRKRIKLSAEKAIFIFVD+VLPPTG +MSS+YEDKKDEDGFLY+TYSGENTFG
Sbjct: 65 VIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFG 118
>AT2G45170.1 | AUTOPHAGY 8E | Chr2:18624545-18625526 FORWARD
LENGTH=122 | 201606
Length = 122
Score = 207 bits (526), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 98/114 (85%), Positives = 109/114 (95%)
Query: 4 SYFKQEHDLEKRKAEAARIREKYPDRVPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVY 63
S FK ++D EKRKAEA RIREKYPDR+PVIVEKAE+S++PNIDKKKYLVP+DLTVGQFVY
Sbjct: 5 SIFKMDNDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVY 64
Query: 64 VIRKRIKLSAEKAIFIFVDDVLPPTGAIMSSIYEDKKDEDGFLYVTYSGENTFG 117
VIRKRIKLSAEKAIFIFVD+VLPPTG +MSS+YEDKKDEDGFLY+TYSGENTFG
Sbjct: 65 VIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFG 118
>AT3G60640.1 | Ubiquitin-like superfamily protein |
Chr3:22416118-22416971 FORWARD LENGTH=121 | 201606
Length = 121
Score = 206 bits (524), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 98/117 (83%), Positives = 110/117 (94%)
Query: 1 MTRSYFKQEHDLEKRKAEAARIREKYPDRVPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60
M+ F+Q+HD EKRKAEA RIREKY DRVPVIVEK+E+SDIPNIDKKKYLVPADLTVGQ
Sbjct: 1 MSNVSFRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQ 60
Query: 61 FVYVIRKRIKLSAEKAIFIFVDDVLPPTGAIMSSIYEDKKDEDGFLYVTYSGENTFG 117
FVYVIRKRI+LSAEKAIFIFVD+VLPPTGA+MS+IY++ K+EDGFLYVTYSGENTFG
Sbjct: 61 FVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTFG 117