BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0600.1
(225 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 126 5e-33
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 126 5e-33
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 81 2e-18
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 126 bits (316), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 109/187 (58%), Gaps = 5/187 (2%)
Query: 1 MEQPPRFASEKF----PDHVCRLKKALYGLKQAPRAWYGKIAEYFLFCGFSSSNSDLSLF 56
M+ PP +A+ + P+ VC LKK++YGLKQA R W+ K + + GF S+SD + F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 57 VKVKGSLSTMILLYVDDMIIAGDDKSEIVRLQDDLFTRFEMKNLGEANCFLGLELEK-VN 115
+K+ +L +L+YVDD+II ++ + + L+ L + F++++LG FLGLE+ +
Sbjct: 270 LKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAA 329
Query: 116 GYFMSQRSYAMKILKRFGMENSNYTTTPMDLGMKLQKNEGKFLSDVTEYRKLVGSLLYLT 175
G + QR YA+ +L G+ ++ PMD + + G D YR+L+G L+YL
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQ 389
Query: 176 IGRPDMA 182
I R D++
Sbjct: 390 ITRLDIS 396
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 126 bits (316), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 109/187 (58%), Gaps = 5/187 (2%)
Query: 1 MEQPPRFASEKF----PDHVCRLKKALYGLKQAPRAWYGKIAEYFLFCGFSSSNSDLSLF 56
M+ PP +A+ + P+ VC LKK++YGLKQA R W+ K + + GF S+SD + F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 57 VKVKGSLSTMILLYVDDMIIAGDDKSEIVRLQDDLFTRFEMKNLGEANCFLGLELEK-VN 115
+K+ +L +L+YVDD+II ++ + + L+ L + F++++LG FLGLE+ +
Sbjct: 270 LKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAA 329
Query: 116 GYFMSQRSYAMKILKRFGMENSNYTTTPMDLGMKLQKNEGKFLSDVTEYRKLVGSLLYLT 175
G + QR YA+ +L G+ ++ PMD + + G D YR+L+G L+YL
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQ 389
Query: 176 IGRPDMA 182
I R D++
Sbjct: 390 ITRLDIS 396
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 81.3 bits (199), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 67 ILLYVDDMIIAGDDKSEIVRLQDDLFTRFEMKNLGEANCFLGLELE-KVNGYFMSQRSYA 125
+LLYVDD+++ G + + L L + F MK+LG + FLG++++ +G F+SQ YA
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 126 MKILKRFGMENSNYTTTPMDLGMKLQKNEGKFLSDVTEYRKLVGSLLYLTIGRPDMAVTK 185
+IL GM + +TP+ L + + K+ D +++R +VG+L YLT+ RPD++
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY-PDPSDFRSIVGALQYLTLTRPDISYAV 121
Query: 186 RIL 188
I+
Sbjct: 122 NIV 124