BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0690.1
(699 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G00150.1 | GRAS family transcription factor | Chr4:57429-5910... 369 e-119
AT2G45160.1 | GRAS family transcription factor | Chr2:18618110-1... 332 e-104
AT3G60630.1 | GRAS family transcription factor | Chr3:22410496-2... 311 8e-97
AT4G36710.1 | GRAS family transcription factor | Chr4:17306060-1... 231 5e-68
AT2G01570.1 | GRAS family transcription factor family protein | ... 135 3e-33
>AT4G00150.1 | GRAS family transcription factor | Chr4:57429-59105
REVERSE LENGTH=558 | 201606
Length = 558
Score = 369 bits (947), Expect = e-119, Method: Compositional matrix adjust.
Identities = 193/364 (53%), Positives = 256/364 (70%), Gaps = 15/364 (4%)
Query: 338 MLDKLFQAAELIETGSSILAQGILARLNHQLSQPVGKPLQRAAFYFKEALLQLLINGTSN 397
+ ++L +AAE+IE+ + LAQGILARLN QLS PVGKPL+RAAFYFKEAL LL N
Sbjct: 205 ITEQLVKAAEVIES-DTCLAQGILARLNQQLSSPVGKPLERAAFYFKEALNNLL----HN 259
Query: 398 SPKTSSPIDVVLKIGAYKAFSEISPLLQFSNFTCNQYLLEALDGFDEIHIIDFDIGIGGQ 457
+T +P ++ KI AYK+FSEISP+LQF+NFT NQ LLE+ GF +HIIDFDIG GGQ
Sbjct: 260 VSQTLNPYSLIFKIAAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIGYGGQ 319
Query: 458 WASFMQEISMKMGGAP-SLRITAFTSQSSNENSLELSLTREHLIHFANDLGISFEINIVN 516
WAS MQE+ ++ AP SL+IT F S +N + LEL T+++L HFA+++ IS +I +++
Sbjct: 320 WASLMQELVLRDNAAPLSLKITVFAS-PANHDQLELGFTQDNLKHFASEINISLDIQVLS 378
Query: 517 LDSFDPSSWSLPFHITENEVLAVNLPIGSSSVDPSSIPSLLCLIKQLSPKIIVSVDRGCD 576
LD SW + +E E +AVN+ S+ S +P +L +K LSP IIV DRGC+
Sbjct: 379 LDLLGSISWP---NSSEKEAVAVNI----SAASFSHLPLVLRFVKHLSPTIIVCSDRGCE 431
Query: 577 RSDLPFAHYLLQSLQAYSILFDSLDATNANPDVINKIERFLLQPRIESTILQRHRSQET- 635
R+DLPF+ L SL +++ LF+SLDA NAN D + KIERFL+QP IE +L R R E
Sbjct: 432 RTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQKIERFLIQPEIEKLVLDRSRPIERP 491
Query: 636 LPPWRNLFASAGLFPLTFSNFTETQAECLIKRVQGRGFHVDKRQASLVLCYQRRELLSVS 695
+ W+ +F G P+T SNFTE+QAECL++R RGFHV+K+ SL+LC+QR EL+ VS
Sbjct: 492 MMTWQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKKHNSLLLCWQRTELVGVS 551
Query: 696 AWRC 699
AWRC
Sbjct: 552 AWRC 555
>AT2G45160.1 | GRAS family transcription factor |
Chr2:18618110-18620032 REVERSE LENGTH=640 | 201606
Length = 640
Score = 332 bits (851), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/382 (47%), Positives = 249/382 (65%), Gaps = 23/382 (6%)
Query: 335 QMTMLDKLFQAAELIET------GSSILAQGILARLNHQL--SQPVGKPLQRAAFYFKEA 386
Q ++++LF AAELI T ++LAQGILARLNH L S P QRAA + EA
Sbjct: 265 QSVIIEQLFNAAELIGTTGNNNGDHTVLAQGILARLNHHLNTSSNHKSPFQRAASHIAEA 324
Query: 387 LLQLLINGTSNSPKTSSPIDVVLKIGAYKAFSEISPLLQFSNFTCNQYLLEALD--GFDE 444
LL L+ N +SP +P +++L+I AY++FSE SP LQF NFT NQ +LE+ + GFD
Sbjct: 325 LLSLIHN--ESSPPLITPENLILRIAAYRSFSETSPFLQFVNFTANQSILESCNESGFDR 382
Query: 445 IHIIDFDIGIGGQWASFMQEISMKMGG-----APSLRITAFTSQSSN-ENSLELSLTREH 498
IHIIDFD+G GGQW+S MQE++ +GG A SL++T F S + EL T E+
Sbjct: 383 IHIIDFDVGYGGQWSSLMQELASGVGGRRRNRASSLKLTVFAPPPSTVSDEFELRFTEEN 442
Query: 499 LIHFANDLGISFEINIVNLDSF-DPSSWSLPFHITENEVLAVNLPIGSSSVDPSSIPSLL 557
L FA ++ I FEI +++++ +P+ W L +E E +AVNLP+ +SV +P +L
Sbjct: 443 LKTFAGEVKIPFEIELLSVELLLNPAYWPLSLRSSEKEAIAVNLPV--NSVASGYLPLIL 500
Query: 558 CLIKQLSPKIIVSVDRGCDRSDLPFAHYLLQSLQAYSILFDSLDATNANPDVINKIERFL 617
+KQLSP I+V DRGCDR+D PF + ++ SLQ ++ L +SLDA D + IERF
Sbjct: 501 RFLKQLSPNIVVCSDRGCDRNDAPFPNAVIHSLQYHTSLLESLDANQNQDD--SSIERFW 558
Query: 618 LQPRIESTILQRHRSQETLPPWRNLFASAGLFPLTFSNFTETQAECLIKRVQGRGFHVDK 677
+QP IE +++RHR E PPWR LF G P + S E QAECL++R RGFHV+K
Sbjct: 559 VQPSIEKLLMKRHRWIERSPPWRILFTQCGFSPASLSQMAEAQAECLLQRNPVRGFHVEK 618
Query: 678 RQASLVLCYQRRELLSVSAWRC 699
RQ+SLV+C+QR+EL++VSAW+C
Sbjct: 619 RQSSLVMCWQRKELVTVSAWKC 640
>AT3G60630.1 | GRAS family transcription factor |
Chr3:22410496-22412367 REVERSE LENGTH=623 | 201606
Length = 623
Score = 311 bits (798), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 184/392 (46%), Positives = 251/392 (64%), Gaps = 24/392 (6%)
Query: 330 QQNQPQ-MTMLDKLFQAA-ELIETGSS---ILAQGILARLNHQLSQPVGK-------PLQ 377
Q +Q Q ++D+LF AA EL G +LAQGILARLNH L+ P
Sbjct: 234 QNDQDQSAVIIDQLFSAAAELTTNGGDNNPVLAQGILARLNHNLNNNNDDTNNNPKPPFH 293
Query: 378 RAAFYFKEALLQLLINGTSNSPKTSSPIDVVLKIGAYKAFSEISPLLQFSNFTCNQYLLE 437
RAA Y EAL LL + + + P S P +++ +I AY+AFSE SP LQF NFT NQ +LE
Sbjct: 294 RAASYITEALHSLLQDSSLSPPSLSPPQNLIFRIAAYRAFSETSPFLQFVNFTANQTILE 353
Query: 438 ALDGFDEIHIIDFDIGIGGQWASFMQEISMKMG---GAPSLRITAFTSQSSNENSLELSL 494
+ +GFD IHI+DFDIG GGQWAS +QE++ K APSL+ITAF S S+ + EL
Sbjct: 354 SFEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAPSLKITAFASPSTVSDEFELRF 413
Query: 495 TREHLIHFANDLGISFEINIVNLDS-FDPSSWSLP-FHITENEVLAVNLPIGSSSVDPSS 552
T E+L FA + G+SFEI ++N++ +P+ W L F +E E +AVNLPI SS+
Sbjct: 414 TEENLRSFAGETGVSFEIELLNMEILLNPTYWPLSLFRSSEKEAIAVNLPI--SSMVSGY 471
Query: 553 IPSLLCLIKQLSPKIIVSVDRGCDR-SDLPFAHYLLQSLQAYSILFDSLDATNA-NPDVI 610
+P +L +KQ+SP ++V DR CDR +D PF + ++ +LQ Y+ L +SLD+ N N +
Sbjct: 472 LPLILRFLKQISPNVVVCSDRSCDRNNDAPFPNGVINALQYYTSLLESLDSGNLNNAEAA 531
Query: 611 NKIERFLLQPRIESTILQRHRSQETLPPWRNLFASAGLFPLTFSNFTETQAECLIKRVQG 670
IERF +QP I+ + R+R E PPWR+LF G P+T S ETQAE L++R
Sbjct: 532 TSIERFCVQPSIQKLLTNRYRWMERSPPWRSLFGQCGFTPVTLSQTAETQAEYLLQRNPM 591
Query: 671 RGFHVDKRQA---SLVLCYQRRELLSVSAWRC 699
RGFH++KRQ+ SLVLC+QR+EL++VSAW+C
Sbjct: 592 RGFHLEKRQSSSPSLVLCWQRKELVTVSAWKC 623
>AT4G36710.1 | GRAS family transcription factor |
Chr4:17306060-17307520 FORWARD LENGTH=486 | 201606
Length = 486
Score = 231 bits (590), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 218/373 (58%), Gaps = 21/373 (5%)
Query: 338 MLDKLFQAAELIETGSSILAQGILARLNHQLSQPVGKPLQRAAFYFKEALLQLLINGTSN 397
++ L + + +E+ LAQ +L+RLN +L P G+PLQRAAFYFKEAL L N
Sbjct: 122 FIEDLIRVVDCVESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFLTGSNRN 181
Query: 398 SPKTSSPIDVVLKIGAYKAFSEISPLLQFSNFTCNQYLLEALDGFDE---IHIIDFDIGI 454
+ SS ++V +I A K +S ISP+ FS+FT NQ +L++L +H++DF+IG
Sbjct: 182 PIRLSSWSEIVQRIRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGF 241
Query: 455 GGQWASFMQEISMKMGGAPSLRITAFTSQSSNENSLELSLTREHLIHFANDLGISFEINI 514
GGQ+AS M+EI+ K LR+TA ++ E ++E L +E+L FA ++ I F+I
Sbjct: 242 GGQYASLMREITEKSVSGGFLRVTAVVAE---ECAVETRLVKENLTQFAAEMKIRFQIEF 298
Query: 515 VNLDSFDPSSW-SLPFHITENEVLAVNLPIGSSSVDPSSIPSLLCLIKQLSPKIIVSVD- 572
V + +F+ S+ ++ F E V+ ++ I S I + ++++SPK++V VD
Sbjct: 299 VLMKTFEMLSFKAIRFVEGERTVVLISPAIFRRL---SGITDFVNNLRRVSPKVVVFVDS 355
Query: 573 RGCDR--SDLPFAHYLLQSLQAYSILFDSLDATNANPDVINKI-ERFLLQPRI----EST 625
G F + +L+ Y+++ +SLDA D++ KI E F+L+P+I E+
Sbjct: 356 EGWTEIAGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKISAAVETA 415
Query: 626 ILQRHRSQETLPPWRNLFASAGLFPLTFSNFTETQAECLIKRVQGRGFHVDKRQASLVLC 685
+RH + T WR F +AG+ P+ S F + QAECL+++ Q RGFHV KRQ LVLC
Sbjct: 416 ADRRHTGEMT---WREAFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHVAKRQGELVLC 472
Query: 686 YQRRELLSVSAWR 698
+ R L++ SAWR
Sbjct: 473 WHGRALVATSAWR 485
>AT2G01570.1 | GRAS family transcription factor family protein |
Chr2:255581-257344 REVERSE LENGTH=587 | 201606
Length = 587
Score = 135 bits (341), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 176/384 (45%), Gaps = 22/384 (5%)
Query: 326 VFTIQQNQPQMTMLDKLFQAAELIETGSSILAQGILARLNHQLSQPVGKPLQRAAFYFKE 385
V + + + ++ L AE I+ + LA+ ++ ++ G +++ A YF E
Sbjct: 209 VILVDSQENGVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGA-MRKVATYFAE 267
Query: 386 ALLQLLINGTSNSPKTSSP---IDVVLKIGAYKAFSEISPLLQFSNFTCNQYLLEALDGF 442
AL + + + S P ID L F E P L+F++FT NQ +LEA +G
Sbjct: 268 ALARRIY-------RLSPPQNQIDHCLSDTLQMHFYETCPYLKFAHFTANQAILEAFEGK 320
Query: 443 DEIHIIDFDIGIGGQWASFMQEISMKMGGAPSLRITAFTSQSSNENSLELSLTREHLIHF 502
+H+IDF + G QW + MQ ++++ GG P+ R+T + +NS L L
Sbjct: 321 KRVHVIDFSMNQGLQWPALMQALALREGGPPTFRLTGI-GPPAPDNSDHLHEVGCKLAQL 379
Query: 503 ANDLGISFEINIVNLDSF-DPSSWSLPFHITENEVLAVN--LPIGSSSVDPSSIPSLLCL 559
A + + FE +S D + L ++ E +AVN + P I +L +
Sbjct: 380 AEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGRPGGIEKVLGV 439
Query: 560 IKQLSPKIIVSVDRGCDRSDLPFAHYLLQSLQAYSILFDSLDATNANPDVINKIERFLLQ 619
+KQ+ P I V++ + + F +SL YS LFDSL+ + D + + L
Sbjct: 440 VKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGVPNSQDKV--MSEVYLG 497
Query: 620 PRIESTIL----QRHRSQETLPPWRNLFASAGLFPLTFSNFTETQAECLIKRVQ-GRGFH 674
+I + + R ETL W N F S+GL P + QA L+ G+G+
Sbjct: 498 KQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYR 557
Query: 675 VDKRQASLVLCYQRRELLSVSAWR 698
V++ L+L + R L++ SAW+
Sbjct: 558 VEESNGCLMLGWHTRPLITTSAWK 581