BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0820.1
(164 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143... 55 3e-09
AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 52 5e-08
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 51 5e-08
AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 50 7e-08
AT1G27870.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 44 1e-05
>AT4G29090.1 | Ribonuclease H-like superfamily protein |
Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
Length = 575
Score = 55.5 bits (132), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 67/125 (53%), Gaps = 5/125 (4%)
Query: 42 QWRPPSTPYLKINVDASFTQLTKPAGIGCIIHDEEANFIIAAANTV-RGQNAEECESLAI 100
+WRPP ++K N DA++ + + GIG ++ +E+ A + + ++ E E A+
Sbjct: 419 RWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAM 478
Query: 101 HYSILWAIQLRIQHVHIESDNQNIIKYINGQSDGLHWQSRQIISKSLD-LKNQFTDIIFT 159
+++L + + +V ESD+Q +I+ +N W S + + L L +QFT++ F
Sbjct: 479 RWAVLSLSRFQYNYVIFESDSQVLIEILNNDEI---WPSLKPTIQDLQRLLSQFTEVKFV 535
Query: 160 YAPRE 164
+ PRE
Sbjct: 536 FIPRE 540
>AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:14484959-14485837 FORWARD
LENGTH=292 | 201606
Length = 292
Score = 51.6 bits (122), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 42 QWRPPSTPYLKINVDASFTQLTKP-AGIGCIIHDEEANFIIAAANTV-RGQNAEECESLA 99
QW+ P ++K N DA++ QL P GIG I+ +E + A + R +N E E A
Sbjct: 136 QWKAPPYQWVKCNTDATW-QLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAELEA 194
Query: 100 IHYSILWAIQLRIQHVHIESDNQNIIKYINGQSDGLHWQSRQIISKSL-DLKNQFTDIIF 158
+ +++L + + + ESD Q ++ +N SD W + Q + + L + F ++ F
Sbjct: 195 LRWAVLTMSRFNYKRIIFESDAQALVNLLN--SDDF-WPTLQPALEDIQQLLHHFEEVKF 251
Query: 159 TYAPR 163
+ PR
Sbjct: 252 EFTPR 256
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 51.2 bits (121), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 13/122 (10%)
Query: 16 INNTSTKPLKIGSIITNKCRDEPRQQQWRPPSTPYLKINVDASFTQLTKPAGIGCIIHDE 75
++NT T + G N+ D R +W PP LK N DAS + +G+G I+ +
Sbjct: 82 LDNTMTNEQQNG----NRNADPSRNTKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNS 137
Query: 76 EANFIIAAANTVRGQ-NAEECESLAIHYSILWAIQLRIQHVH----IESDNQNIIKYING 130
+ I +G+ EE E +++WAIQ H E DNQ I + IN
Sbjct: 138 QGTVIECGMGKFQGRMTTEEAEC----STLIWAIQASYGFGHKKVIFEGDNQTITRMINT 193
Query: 131 QS 132
+S
Sbjct: 194 KS 195
>AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:1535561-1536226 FORWARD
LENGTH=221 | 201606
Length = 221
Score = 50.4 bits (119), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
Query: 37 EPRQQQWRPPSTPYLKINVDASFTQLTKPAGIGCIIHDEEANFIIAAANTVRG--QNAEE 94
E Q+W P ++K N D SF T+ G +I D++ F AA V G NA E
Sbjct: 57 ESTHQKWEQPPMGWIKCNYDGSFNYRTQQTNSGWLIRDDKG-FYKGAAQAVGGTMNNALE 115
Query: 95 CESLAIHYSILWAIQLRIQHVHIESDNQNIIKYINGQSDGLHWQSRQIISKSLDLKNQFT 154
E A+ ++ + V E D++ + + +N + +H+ + I ++ +F
Sbjct: 116 SELQALVMAMQHTWSQGYRKVIFEGDSKQVEELLNRKQ--MHFGAFNWIREAWSWSKRFE 173
Query: 155 DIIFTYAPR 163
++IF++ PR
Sbjct: 174 EVIFSWTPR 182
>AT1G27870.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr1:9706657-9707298 REVERSE
LENGTH=213 | 201606
Length = 213
Score = 44.3 bits (103), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Query: 35 RDEPRQQQWRPPSTPYLKINVDASFTQLTKPAGIGCIIHDEEANFIIAAANTVRG-QNAE 93
R+E +WR P ++K N D SF + G ++ D ++++A R NA
Sbjct: 44 REEDNHDRWRRPERGWIKCNFDGSFVNGDVKSKAGWVVRDSNGSYLLAGQAIGRKVDNAL 103
Query: 94 ECESLAIHYSILWAIQLRIQHVHIESDNQNIIKYING 130
E E A+ S+ + V E DN+ + ING
Sbjct: 104 ESEIQALIISMQHCWSHGYKRVCFEGDNKMLFDLING 140