BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0840.1
(334 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G47500.1 | Pectin lyase-like superfamily protein | Chr5:19271... 534 0.0
AT5G19730.1 | Pectin lyase-like superfamily protein | Chr5:66705... 312 e-105
AT5G55590.1 | Pectin lyase-like superfamily protein | Chr5:22519... 286 7e-95
AT2G36710.1 | Pectin lyase-like superfamily protein | Chr2:15389... 285 7e-94
AT1G05310.1 | Pectin lyase-like superfamily protein | Chr1:15506... 264 9e-86
>AT5G47500.1 | Pectin lyase-like superfamily protein |
Chr5:19271262-19272845 REVERSE LENGTH=362 | 201606
Length = 362
Score = 534 bits (1375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 250/317 (78%), Positives = 275/317 (86%)
Query: 18 HRHRHKWVGPSGFRRISVDARGTGDFLSVQAAIESIPDNNSQNVLIKIHAGIYIEKVVVP 77
H H KWVGPSG + I+V G F SVQ A++SIP NN++++ IKI G Y EKVVVP
Sbjct: 46 HHHHRKWVGPSGHKVITVSLNGHAQFRSVQDAVDSIPKNNNKSITIKIAPGFYREKVVVP 105
Query: 78 ATKPYITFQGEGKESTVIEWHDRASDKGANGQQLRTYKTASVIVLANYFSAKNISFKNTA 137
ATKPYITF+G G++ T IEWHDRASD GANGQQLRTY+TASV V ANYF+A+NISF NTA
Sbjct: 106 ATKPYITFKGAGRDVTAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTARNISFTNTA 165
Query: 138 PAPMPGMEGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGN 197
PAP+PGM+GWQA AFRISGDKA+FSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGN
Sbjct: 166 PAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGN 225
Query: 198 GRSMYKDCELHSIATRFGSIAAQDRNSPYDKTGFAFVRCRVTGTGPLYVGRAMGQYSRIV 257
GRSMYKDCELHSIA+RFGSIAA R P +KTGFAFV CRVTGTGPLYVGRAMGQYSRIV
Sbjct: 226 GRSMYKDCELHSIASRFGSIAAHGRTCPEEKTGFAFVGCRVTGTGPLYVGRAMGQYSRIV 285
Query: 258 YSYTYFDDIVARGGWDDWDHTSNKNKTAFFGVYKCYGPGAEAVRGVSWARELDYNTAHPF 317
Y+YTYFD +VA GGWDDWDH SNK+KTAFFGVY CYGPGA A RGVSWAR LDY +AHPF
Sbjct: 286 YAYTYFDALVAHGGWDDWDHKSNKSKTAFFGVYNCYGPGAAATRGVSWARALDYESAHPF 345
Query: 318 IAKSFVNGRHWISPFDS 334
IAKSFVNGRHWI+P D+
Sbjct: 346 IAKSFVNGRHWIAPRDA 362
>AT5G19730.1 | Pectin lyase-like superfamily protein |
Chr5:6670562-6673202 FORWARD LENGTH=383 | 201606
Length = 383
Score = 312 bits (800), Expect = e-105, Method: Compositional matrix adjust.
Identities = 147/289 (50%), Positives = 197/289 (68%), Gaps = 1/289 (0%)
Query: 41 GDFLSVQAAIESIPDNNSQNVLIKIHAGIYIEKVVVPATKPYITFQGEGKESTVIEWHDR 100
GDF +Q AI+S+P N V+IK+HAG+Y EKV +P K +IT +GEG E T +EW D
Sbjct: 94 GDFTKIQDAIDSLPLINFVRVVIKVHAGVYKEKVSIPPLKAFITIEGEGAEKTTVEWGDT 153
Query: 101 ASDKGANGQQLRTYKTASVIVLANYFSAKNISFKNTAPAPMPGMEGWQAAAFRISGDKAY 160
A + G + TY +AS V + +F AKNI+F+NT P P+PG G QA A R+S D A
Sbjct: 154 AQTPDSKGNPMGTYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVALRVSADNAA 213
Query: 161 FSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQ 220
F GC GAQDTL D GRHY+K+CYIEGS+DFIFGN S+Y+ C +H+IA + G++ AQ
Sbjct: 214 FFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIADKLGAVTAQ 273
Query: 221 DRNSPYDKTGFAFVRCRVTGTGPLYVGRAMGQYSRIVYSYTYFDDIVARGGWDDWDHTSN 280
R+S + TGF+FV+C+VTGTG LY+GRA G +SR+V++YTY D+I+ GW +W S
Sbjct: 274 GRSSVLEDTGFSFVKCKVTGTGVLYLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPS- 332
Query: 281 KNKTAFFGVYKCYGPGAEAVRGVSWARELDYNTAHPFIAKSFVNGRHWI 329
+ T F+G YKC G GA V+WAREL A PF++ +F++G WI
Sbjct: 333 REMTVFYGQYKCTGAGANYGGRVAWARELTDEEAKPFLSLTFIDGSEWI 381
>AT5G55590.1 | Pectin lyase-like superfamily protein |
Chr5:22519911-22521699 FORWARD LENGTH=380 | 201606
Length = 380
Score = 286 bits (733), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 147/301 (48%), Positives = 198/301 (65%), Gaps = 4/301 (1%)
Query: 31 RRISVDARGTGDFLSVQAAIESIPDNNSQNVLIKIHAGIYIEKVVVPATKPYITFQGEGK 90
R I VD G GD ++VQ A++ +PD+NSQ V I I GIY EKV+VP +KPYI+F G
Sbjct: 80 RVIVVDKNGGGDSVTVQGAVDMVPDSNSQRVKIFILPGIYREKVIVPKSKPYISFIGNES 139
Query: 91 ES--TVIEWHDRASDKGANGQQLRTYKTASVIVLANYFSAKNISFKNTAPAPMPGMEGWQ 148
+ TVI W D+ASD G +G++L TY+TASV + +++F A I+F+NT A G +G Q
Sbjct: 140 YAGDTVISWSDKASDLGCDGKELGTYRTASVSIESDFFCATAITFENTVVAE-AGEQGRQ 198
Query: 149 AAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELH 208
A A RI GDKA F G+QDTL DD G HYF +CYI+G++DFIFGN +S+Y+DC++H
Sbjct: 199 AVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIH 258
Query: 209 SIATRFGSIAAQDRNSPYDKTGFAFVRCRVTGTGPLYVGRAMGQYSRIVYSYTYFDDIVA 268
S A R+G+IAA R+S + TGF+FV C ++GTG +Y+GRA G YSR VYS + DI+
Sbjct: 259 STAKRYGAIAAHHRDSETEDTGFSFVNCDISGTGQIYLGRAWGNYSRTVYSNCFIADIIT 318
Query: 269 RGGWDDWDHTSNKNKTAFFGVYKCYGPGAEAVRGVSWARELDYNTAHPFIAKSFVNGRHW 328
GW DW H + K FG Y C G GAE V W++ L + PF+ + F+ G W
Sbjct: 319 PVGWSDWKHPERQRK-VMFGEYNCRGRGAERGGRVPWSKTLTRDEVKPFLGREFIYGDQW 377
Query: 329 I 329
+
Sbjct: 378 L 378
>AT2G36710.1 | Pectin lyase-like superfamily protein |
Chr2:15389614-15391200 REVERSE LENGTH=407 | 201606
Length = 407
Score = 285 bits (729), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 200/316 (63%), Gaps = 15/316 (4%)
Query: 19 RHRHKWVGPSGFRRISVDARGTGDFLSVQAAIESIPDNNSQNVLIKIHAGIYIEKVVVPA 78
R RH++ ++VD G G+F +VQ+AI+ +PD +S LI +++G Y EKV V
Sbjct: 80 RLRHQYKTS---LVLTVDLHGCGNFSNVQSAIDVVPDLSSSKTLIIVNSGSYREKVTVNE 136
Query: 79 TKPYITFQGEGKESTVIEWHDRASDKGANGQQLRTYKTASVIVLANYFSAKNISFKNTAP 138
K + QG G ++T IEW+D A G T + S +V A F+A NISFKN AP
Sbjct: 137 NKTNLVIQGRGYQNTSIEWNDTAKSAG------NTADSFSFVVFAANFTAYNISFKNNAP 190
Query: 139 APMPGMEGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNG 198
P PG QA A RI GD+A F GCGFYGAQDTL DD GRH+FKEC+I+GSIDFIFGNG
Sbjct: 191 EPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNG 250
Query: 199 RSMYKDCELHSIAT-----RFGSIAAQDRNSPYDKTGFAFVRCRVTGTGPLYVGRAMGQY 253
RS+Y+DC ++SIA GSI AQ R S +++GF+FV C++ G+G + +GRA G Y
Sbjct: 251 RSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKIDGSGEILLGRAWGAY 310
Query: 254 SRIVYSYTYFDDIVARGGWDDWDHTSNKNKTAFFGVYKCYGPGAEAVRGVSWARELDYNT 313
+ +V+S TY I+ GW++W S K KT FG +KCYGPGA+ V + ++L +
Sbjct: 311 ATVVFSNTYMSGIITPEGWNNWGD-STKEKTVTFGEHKCYGPGADYKERVLFGKQLTDSE 369
Query: 314 AHPFIAKSFVNGRHWI 329
A FI SF++G W+
Sbjct: 370 ASSFIDVSFIDGDEWL 385
>AT1G05310.1 | Pectin lyase-like superfamily protein |
Chr1:1550615-1552434 REVERSE LENGTH=393 | 201606
Length = 393
Score = 264 bits (674), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 134/305 (43%), Positives = 198/305 (64%), Gaps = 15/305 (4%)
Query: 33 ISVDARGTGDFLSVQAAIESIPDNNSQNVLIKIHAGIYIEKVVVPATKPYITFQGEGKES 92
+ VD G +F +VQ+A++++ + + + +I I++G+Y EKVV+P TKP IT QG+G +
Sbjct: 91 LCVDKNGCCNFTTVQSAVDAVGNFSQRRNVIWINSGMYYEKVVIPKTKPNITLQGQGFDI 150
Query: 93 TVIEWHDRASDKGANGQQLRTYKTASVIVLANYFSAKNISFKNTAPAPMPGMEGWQAAAF 152
T I W+D A ANG T+ A+V V + F AKNISF N AP P PG G QA A
Sbjct: 151 TAIAWNDTA--YSANG----TFYCATVQVFGSQFVAKNISFMNVAPIPKPGDVGAQAVAI 204
Query: 153 RISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIAT 212
RI+GD++ F GCGF+GAQDTL DD GRHYFK+CYI+GSIDFIFGN +S+Y+DC + S+A
Sbjct: 205 RIAGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMAN 264
Query: 213 RF--------GSIAAQDRNSPYDKTGFAFVRCRVTGTGPLYVGRAMGQYSRIVYSYTYFD 264
+ G++ A R+S + +GF+FV C + GTG +++GRA YSR+V+ T
Sbjct: 265 QLSPGSKAVNGAVTANGRSSKDENSGFSFVNCTIGGTGHVWLGRAWRPYSRVVFVSTTMT 324
Query: 265 DIVARGGWDDWDHTSNKNKTAFFGVYKCYGPGAEAVRGVSWARELDYNTAHPFIAKSFVN 324
D++A GW++++ S ++ T F+G Y C GPGA+ + + ++L+ I SF++
Sbjct: 325 DVIAPEGWNNFNDPS-RDATIFYGEYNCSGPGADMSKRAPYVQKLNETQVALLINTSFID 383
Query: 325 GRHWI 329
G W+
Sbjct: 384 GDQWL 388