BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0890.1
(762 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 140 2e-34
AT4G20520.1 | RNA binding / RNA-directed DNA polymerase | Chr4:1... 91 2e-19
ATMG01250.1 | RNA-directed DNA polymerase (reverse transcriptase... 68 3e-13
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 71 1e-12
AT3G24255.5 | RNA-directed DNA polymerase (reverse transcriptase... 56 1e-07
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 140 bits (353), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 190/407 (46%), Gaps = 27/407 (6%)
Query: 110 NSLWLVIGDLNCILDPSEKRGGQPAHLPTIQLH--KNMINELGLHDLGYVGYPYTWTNRQ 167
+ L +++GD + I S+ +P L +N + + L D+ G YTW+N Q
Sbjct: 218 DQLMILVGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQ 277
Query: 168 FAGNLIEERLDRAVANYNWISSYPHSRINHLDTLG-SDHKPILLATKNHSAIGRKPFKFI 226
N I +LDRA+AN +W SS+P S I + G SDH P ++ +N +K F++
Sbjct: 278 -DDNPIIRKLDRAIANGDWFSSFP-SAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYF 335
Query: 227 RTWMSHPNCASFINSTWLKQPIQIQLKLNSLA--IKLAK-----WNKEVFGNLEMTIKQL 279
+HP + W +Q I + + SL +K AK N++ FGN++ K+
Sbjct: 336 SFLSTHPTFLVSLTVAWEEQ-IPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEA 394
Query: 280 TQNLQKINN--IEEFRNTYSQIENLLLQQ--------ESLWKEKSRIANINLGDRNTQYF 329
+L+ I + + ++ ++E++ ++ ES +++KSRI + GD NT++F
Sbjct: 395 LDSLESIQSQLLTNPSDSLFRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFF 454
Query: 330 HAKATTRLRKNKILAIKKEDNTWVNDEAEIAMLFSRHIQQISTTAGSFFS----SKITSC 385
H KN I ++ +D+ V + ++ + + + + + +I
Sbjct: 455 HKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQRIKDI 514
Query: 386 FETQISDEQNESITAIPHSDEIRKAIFSLKPGAAPGPDGFPPYFYQSNWETVKEDIHLMT 445
+ +D ++A+P EI A+F++ APGPD F F+ +W VK+
Sbjct: 515 HPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAV 574
Query: 446 NSFFQYSTLPEMANHTHICLLPKTKTPQLPADYRPISLLNTTYKIIT 492
FF+ L + N T I L+PK + +RP+S YKIIT
Sbjct: 575 KEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVVYKIIT 621
>AT4G20520.1 | RNA binding / RNA-directed DNA polymerase |
Chr4:11045912-11047716 FORWARD LENGTH=376 | 201606
Length = 376
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 54/82 (65%)
Query: 495 LANRLKPILTDIISPFQGAYVPGRQITDNIIISQEIIHSFKKVKGSKSYFGLKLDMSKAF 554
+ RLKP++T++I P Q +++PGR TDNI+ QE +HS ++ KG K + LKLD+ KA+
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60
Query: 555 DRIEWSYLASVMNLMGFSSKWI 576
DRI W YL + GF W+
Sbjct: 61 DRIRWDYLEDTLISAGFPEVWL 82
>ATMG01250.1 | RNA-directed DNA polymerase (reverse transcriptase) |
ChrM:310514-310882 FORWARD LENGTH=122 | 201606
Length = 122
Score = 67.8 bits (164), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 591 LINGRPGSTFNVSRGIRQGDPLSPFLFAIAMEGLSRLLEKNQNESSFIGFPIPNANFSIK 650
+ING P SRG+RQGDPLSP+LF + E LS L + Q + G + N + I
Sbjct: 13 IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72
Query: 651 HLLFADDCIIFGQNSLENIFNLKQILKEFSDA----SGQMINYAKSNIFFL 697
HLLFADD +S I QI F + G +N+ SN++FL
Sbjct: 73 HLLFADD-----TSSARWIPLAAQIWPIFFLSMRLFQGNPVNHPMSNLYFL 118
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 16/232 (6%)
Query: 102 LASLTPSGNSLWLVIGDLNCILDPSEKRGGQPAHLPTIQLH--KNMINELGLHDLGYVGY 159
L++ +P NS WLV+GD N I +E P+++ L + + + L DL G
Sbjct: 111 LSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMRDSDLVDLPCRGV 170
Query: 160 PYTWTNRQFAGNLIEERLDRAVANYNWISSYPHSRINHLDTLGSDHKPILLATKNHSAIG 219
YTW+N Q N I +LDRA+ N W++++P + SDH ++ N +
Sbjct: 171 LYTWSNHQ-QDNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAACMVILNNSPPLS 229
Query: 220 RK-PFKFIRTWMSHPNCASFINSTWLKQPIQIQLKLNSLAIKLAKWNKEVFGNLEMTIKQ 278
+K FK+ +HP+ S I + W Q ++ + S L + KE ++
Sbjct: 230 KKKSFKYFSFLSTHPDFISSILAAW-----QKEIAVGSFMFSLGELLKEAKKACRGLNRR 284
Query: 279 LTQNLQK--INNIEEF--RNTYSQIEN---LLLQQESLWKEKSRIANINLGD 323
N+Q ++N +F R + +N ES +K+KSRI + GD
Sbjct: 285 GFSNIQAQLMSNPSDFLFRAEHVARKNWNFFAAALESFYKQKSRIKWLKEGD 336
>AT3G24255.5 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8790907 FORWARD LENGTH=532 | 201606
Length = 532
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 649 IKHLLFADDCIIFGQNSLENIFNLKQILKEFSDASGQMINYAKSNIFFLKNSHPKFKRMI 708
I HL FADD ++F +I + QI +F+D SG I+ KS I ++ K I
Sbjct: 8 ITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTI-YMAGVKDNDKADI 66
Query: 709 IRELKVHQSSSGDKYLGTKLFIDRNKKQAFTSLVTQIKNKLAKWQSHLLSQAGR 762
+ + +YLG L + + LV +I+ ++ KW + LS AGR
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGR 120