BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0920.1
(235 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G60550.1 | cyclin p3%3B2 | Chr3:22379846-22380641 FORWARD LEN... 263 5e-89
AT2G45080.1 | cyclin p3%3B1 | Chr2:18591688-18592443 FORWARD LEN... 261 1e-88
AT5G07450.1 | cyclin p4%3B3 | Chr5:2358418-2359253 REVERSE LENGT... 145 5e-43
AT2G44740.1 | cyclin p4%3B1 | Chr2:18442287-18443304 REVERSE LEN... 144 1e-42
AT5G61650.1 | CYCLIN P4%3B2 | Chr5:24778265-24779019 FORWARD LEN... 138 3e-40
>AT3G60550.1 | cyclin p3%3B2 | Chr3:22379846-22380641 FORWARD
LENGTH=230 | 201606
Length = 230
Score = 263 bits (671), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 128/212 (60%), Positives = 165/212 (77%), Gaps = 11/212 (5%)
Query: 8 ISPRKLQADIYSISYNEDSRKKGYVPPVISILASLLQRTITKNERIVNKCTWELWKTSKN 67
ISPRKL++D+YS SY +S+ P VIS+L+SL+ RT+T+NERI + S
Sbjct: 9 ISPRKLRSDLYSYSYQNNSK----TPLVISVLSSLIDRTLTRNERISRRAL-----PSSG 59
Query: 68 DNQRTCVFDCYQIPDMSIEAFLERTFRYTRISSQVYIVAYVYIDRLCQIHPQFQITSCNV 127
+T +FDC +IPDM+I+++L R FRYT+ VY+VAYVYIDR CQ +P F+I+ NV
Sbjct: 60 AGGKTQIFDCREIPDMTIQSYLGRIFRYTKAGPSVYVVAYVYIDRFCQTNPGFRISLTNV 119
Query: 128 YRLLITTIMVASKFVEDRNYKNSYFAKVGGLTTREINKLEVEFLFLMGFKLNVNVSIFKS 187
+RLLITTIM+ASK+VED NY+NSYFAKVGGL T ++NKLE+EFLFLMGFKL+VNVS+F+S
Sbjct: 120 HRLLITTIMIASKYVEDLNYRNSYFAKVGGLETEDLNKLELEFLFLMGFKLHVNVSVFES 179
Query: 188 YCSHLEREVSIGGGYEIEKTLQLLCTEEIKAK 219
YC HLEREVS GGGY+IEK L+ C EEIK++
Sbjct: 180 YCCHLEREVSFGGGYQIEKALR--CAEEIKSR 209
>AT2G45080.1 | cyclin p3%3B1 | Chr2:18591688-18592443 FORWARD
LENGTH=222 | 201606
Length = 222
Score = 261 bits (667), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 166/215 (77%), Gaps = 14/215 (6%)
Query: 5 TTPISPRKLQADIYSISYNEDSRKKGYVPPVISILASLLQRTITKNERIVNKCTWELWKT 64
+ ISPRKL++D+YS SY +DS VP VIS+L+SL++RT+ +NERI
Sbjct: 3 SLAISPRKLRSDLYSYSYQDDSNT---VPLVISVLSSLIERTLARNERI---------SR 50
Query: 65 SKNDNQRTCVFDCYQIPDMSIEAFLERTFRYTRISSQVYIVAYVYIDRLCQIHPQFQITS 124
S +T VFDC +IPDM+I+++LER FRYT+ VY+VAYVYIDR CQ + F+I+
Sbjct: 51 SYGGFGKTRVFDCREIPDMTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQNNQGFRISL 110
Query: 125 CNVYRLLITTIMVASKFVEDRNYKNSYFAKVGGLTTREINKLEVEFLFLMGFKLNVNVSI 184
NV+RLLITTIM+ASK+VED NYKNSYFAKVGGL T ++N LE+EFLFLMGFKL+VNVS+
Sbjct: 111 TNVHRLLITTIMIASKYVEDMNYKNSYFAKVGGLETEDLNNLELEFLFLMGFKLHVNVSV 170
Query: 185 FKSYCSHLEREVSIGGGYEIEKTLQLLCTEEIKAK 219
F+SYC HLEREVSIGGGY+IEK L+ C EEIK++
Sbjct: 171 FESYCCHLEREVSIGGGYQIEKALR--CAEEIKSR 203
>AT5G07450.1 | cyclin p4%3B3 | Chr5:2358418-2359253 REVERSE
LENGTH=216 | 201606
Length = 216
Score = 145 bits (365), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 113/171 (66%), Gaps = 9/171 (5%)
Query: 32 VPPVISILASLLQRTITKNERIVNKCTWELWKTSKNDNQRTCVFDCYQIPDMSIEAFLER 91
+P VI+ ++SLLQR N+ +L + + +++R F+ P +SI +++ER
Sbjct: 20 MPNVITAMSSLLQRVSETND--------DLSRPFR-EHKRISAFNAVTKPSISIRSYMER 70
Query: 92 TFRYTRISSQVYIVAYVYIDRLCQIHPQFQITSCNVYRLLITTIMVASKFVEDRNYKNSY 151
F+Y S YIVAY+Y+DR Q P I S NV+RL+IT+++V++KF++D Y N++
Sbjct: 71 IFKYADCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAF 130
Query: 152 FAKVGGLTTREINKLEVEFLFLMGFKLNVNVSIFKSYCSHLEREVSIGGGY 202
+AKVGG+TT E+N LE++FLF +GF+LNV +S + YCS L+RE+ + Y
Sbjct: 131 YAKVGGITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVMRTMY 181
>AT2G44740.1 | cyclin p4%3B1 | Chr2:18442287-18443304 REVERSE
LENGTH=202 | 201606
Length = 202
Score = 144 bits (362), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 109/164 (66%), Gaps = 9/164 (5%)
Query: 35 VISILASLLQRTITKNERIVNKCTWELWKTSKNDNQRTCVFDCYQIPDMSIEAFLERTFR 94
+I+ L+SLL+R N+ L + +QR VF P ++I+++LER F+
Sbjct: 13 LIAFLSSLLERVAESND---------LTRRVATQSQRVSVFHGLSRPTITIQSYLERIFK 63
Query: 95 YTRISSQVYIVAYVYIDRLCQIHPQFQITSCNVYRLLITTIMVASKFVEDRNYKNSYFAK 154
Y S ++VAYVY+DR P I S NV+RLLIT++MVA+KF++D Y N+Y+AK
Sbjct: 64 YANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAK 123
Query: 155 VGGLTTREINKLEVEFLFLMGFKLNVNVSIFKSYCSHLEREVSI 198
VGG++T+E+N LE++FLF +GF+LNV + F +Y S+L++E+++
Sbjct: 124 VGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTL 167
>AT5G61650.1 | CYCLIN P4%3B2 | Chr5:24778265-24779019 FORWARD
LENGTH=219 | 201606
Length = 219
Score = 138 bits (347), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 105/167 (62%), Gaps = 13/167 (7%)
Query: 32 VPPVISILASLLQRTITKNERIVNKCTWELWKTSKNDNQRTCVFDCYQIPDMSIEAFLER 91
+P V++ ++ LLQR N+ + K Q+ F P +SI ++LER
Sbjct: 22 MPSVLTAMSYLLQRVSETNDNLSQK-------------QKPSSFTGVTKPSISIRSYLER 68
Query: 92 TFRYTRISSQVYIVAYVYIDRLCQIHPQFQITSCNVYRLLITTIMVASKFVEDRNYKNSY 151
F Y S YIVAY+Y+DR + P I S NV+RL+IT+++V++KF++D +Y N Y
Sbjct: 69 IFEYANCSYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEY 128
Query: 152 FAKVGGLTTREINKLEVEFLFLMGFKLNVNVSIFKSYCSHLEREVSI 198
+AKVGG++ E+N LE++FLF +GF+LNV VS F +YC L+RE+++
Sbjct: 129 YAKVGGISREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMAM 175