BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000130.1_g0930.1
         (156 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G24255.1 | RNA-directed DNA polymerase (reverse transcriptase...    44   2e-05

>AT3G24255.1 | RNA-directed DNA polymerase (reverse
           transcriptase)-related family protein |
           Chr3:8789471-8793208 FORWARD LENGTH=746 | 201606
          Length = 746

 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 14/96 (14%)

Query: 3   QRIATLQKSFWW---EKSKRICTKAWSYICLPKKLGGLGIRRPHLDNTG---------IL 50
           + I ++  SF W   E + +    AWS +C PK  GGLGIR     N G          L
Sbjct: 93  KEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKEANKGSFWSISGNTTL 152

Query: 51  SKLAWRLKSDHRPF--GHITWEVHTGENINIWKDKW 84
               W+    HR    G +  ++H G N + W D W
Sbjct: 153 GSWMWKKILKHRALASGFVKHDIHNGSNTSFWFDNW 188


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