BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000130.1_g0970.1
         (258 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G45060.1 | alanine-tRNA ligase | Chr2:18584674-18586688 REVER...   272   7e-92
AT4G26410.1 | chromosome-associated kinesin | Chr4:13346760-1334...   116   4e-31

>AT2G45060.1 | alanine-tRNA ligase | Chr2:18584674-18586688 REVERSE
           LENGTH=272 | 201606
          Length = 272

 Score =  272 bits (696), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 136/233 (58%), Positives = 176/233 (75%)

Query: 26  EMSSPWIEYAVEQAQFVQKTLEDNLDYAIQITGSRLSEIRSTSAAHLHLTLDSLQNIKSE 85
           E ++ WI+ A+ QA   QKT+ + +D  I  + +RLS+IR TS AH   T+DSL++I SE
Sbjct: 40  ENAASWIDDALRQALVYQKTITETVDSTIDASKARLSQIRDTSVAHTSQTIDSLRDIASE 99

Query: 86  FAAYEDIFFGKVKEGVNIAILHPEVTCGTAVGLGLVALKRPRRFLINKASQLFMSEETLL 145
           +  YE + FGK+K+GVN+A  HP ++   A G+G+ ALK+ RRF+     ++F+SEE LL
Sbjct: 100 YNVYEQMVFGKIKDGVNVAASHPLISGTLAFGVGIFALKKTRRFVYYNTVRMFVSEEALL 159

Query: 146 SRADAKVKELRQSIELVKAEGEKLEKRAIQAEEEMKRGRTKLRQAGNQIQGVIRSAYKIE 205
           SRAD KVKELRQS++ +KAE EKLE+ A  AEEE  RGR KLRQAG QI+G I SAYKIE
Sbjct: 160 SRADLKVKELRQSMDRLKAESEKLERVATVAEEEFIRGRMKLRQAGKQIRGAISSAYKIE 219

Query: 206 RQARGLKDILGELPSREASRFRSQVSSLASEAKRERNTLTKEVSRISNYGISV 258
           +QA GLKD+L ELP+REASRFR+Q+S  ASE K+ERN LTKEV++ISNYGISV
Sbjct: 220 KQAAGLKDVLKELPTREASRFRTQISKRASEVKQERNALTKEVNKISNYGISV 272


>AT4G26410.1 | chromosome-associated kinesin |
           Chr4:13346760-13348791 FORWARD LENGTH=263 | 201606
          Length = 263

 Score =  116 bits (290), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 130/231 (56%), Gaps = 8/231 (3%)

Query: 32  IEYAVEQAQ----FVQKTLEDNLDYAIQITGSRLSEIRSTSAAHLHLTLDSLQNIKSEFA 87
           +E A+E A+     +Q+T++++ D A++   S    +R  S +      D + +  +++ 
Sbjct: 37  VEGAIEGAEKWVGDLQRTVKESKDTAMRSARS----LRENSTSQFRSIQDFIPHALTQYK 92

Query: 88  AYEDIFFGKVKEGVNIAILHPEVTCGTAVGLGLVALKRPRRFLINKASQLFMSEETLLSR 147
            YE+ FF KV + +  A  HP    G  V   LV ++ PRRFL       F SEE    +
Sbjct: 93  TYENAFFSKVTDELIYAKEHPAAAIGIGVAASLVLMRGPRRFLFRNTLGRFQSEEAQFLK 152

Query: 148 ADAKVKELRQSIELVKAEGEKLEKRAIQAEEEMKRGRTKLRQAGNQIQGVIRSAYKIERQ 207
           A+  V+EL  S++L+K E  KL +R   AE++MKRG ++L  +GN I  + +S +K E +
Sbjct: 153 AEKHVQELNMSVDLMKKESRKLLERTALAEKDMKRGLSELMNSGNDIHRLAKSVHKAECE 212

Query: 208 ARGLKDILGELPSREASRFRSQVSSLASEAKRERNTLTKEVSRISNYGISV 258
           A  L D L ++P R+A + R++V+S+ S  +++R  L K +  +S+ G+SV
Sbjct: 213 AADLMDGLRQIPGRDAIKLRAEVASMTSLLRQKRIALNKRIMGMSDLGVSV 263


Top