BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g1070.1
(207 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 73 2e-15
AT3G09510.1 | Ribonuclease H-like superfamily protein | Chr3:292... 54 3e-08
AT1G52990.1 | thioredoxin family protein | Chr1:19740503-1974344... 50 3e-07
AT1G52990.2 | thioredoxin family protein | Chr1:19741201-1974344... 50 3e-07
AT1G27870.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 48 1e-06
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 72.8 bits (177), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 17/217 (7%)
Query: 1 MWIIWKTRYDSCFQCIKVETKDII----NTIKSYPENPYEISTKKSDKRRNVDP------ 50
MW IWK+ D F + + + + N K + +N ++ ++ + RN DP
Sbjct: 48 MWRIWKSGNDLVFNHTRTKFQTTVEMALNDTKEWLDN--TMTNEQQNGNRNADPSRNTKW 105
Query: 51 --PIEPYLKINVDASFTSINVFIGTGLVAHNKEAKFIEATVAVSRAR-NSEEIEAVAIYN 107
P LK N DAS N G G + N + IE + + R +EE E +
Sbjct: 106 SPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTLIW 165
Query: 108 GIQWAIDRAYKYIIIESDNYNLIKHIQDRRHTIMWQSRIHIHKIRKMIPKFDSILFYYTM 167
IQ + +K +I E DN + + I + Q + I+ IP F+SI F +
Sbjct: 166 AIQASYGFGHKKVIFEGDNQTITRMINTKSSNPRLQH--FLDTIQSWIPSFESIEFSFKH 223
Query: 168 RSLNSQTDLLAKWARKKKSDKTWKHVSYFSFKQYCNS 204
R N D LAK A K+ + + H + Y N+
Sbjct: 224 REQNGCADFLAKQAIKENTQWSLFHSCPYFLSPYVNN 260
>AT3G09510.1 | Ribonuclease H-like superfamily protein |
Chr3:2921804-2923258 FORWARD LENGTH=484 | 201606
Length = 484
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 76/195 (38%), Gaps = 19/195 (9%)
Query: 1 MWIIWKTRYDSCFQ-----------CIKVETKDIINTIKSYPENPYEISTKKSDKRRNVD 49
+W IWK R + F K ET D +N +S+ + P +K +
Sbjct: 269 IWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRN 328
Query: 50 PPIEPYLKINVDASFTSINVFIGTGLVAHNKEAKFIE-ATVAVSRARNSEEIEAVAIYNG 108
PP Y+K N DA F + G + N I ++ ++ N E E A+
Sbjct: 329 PPAT-YVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAA 387
Query: 109 IQWAIDRAYKYIIIESDNYNLIKHIQDRRHTIMWQSRI--HIHKIRKMIPKFDSILFYYT 166
+Q R Y + +E D LI I I + S + H+ I KF SI F +
Sbjct: 388 LQQTWIRGYTQVFMEGDCQTLINLING----ISFHSSLANHLEDISFWANKFASIQFGFI 443
Query: 167 MRSLNSQTDLLAKWA 181
R N +LAK+
Sbjct: 444 RRKGNKLAHVLAKYG 458
>AT1G52990.1 | thioredoxin family protein | Chr1:19740503-19743449
REVERSE LENGTH=313 | 201606
Length = 313
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 3/132 (2%)
Query: 56 LKINVDASFTSINVFIGTGLVAHNKEAKFIEATVAVSRAR-NSEEIEAVAIYNGIQWAID 114
+K N DAS +V G G + N + +E + + R EE E A+ IQ
Sbjct: 48 VKCNYDASHHEGDVVSGLGWLIRNSQGTVLECGMGKFQGRMTPEEAECSALIWAIQATSA 107
Query: 115 RAYKYIIIESDNYNLIKHIQDRRHTIMWQSRIHIHKIRKMIPKFDSILFYYTMRSLNSQT 174
Y +I E DN N+ + I + + + ++ I+ IP F S F +T R N
Sbjct: 108 FGYTKVIFEGDNSNVNRLINTKSDNP--RLKHYLDTIKSWIPSFTSTEFIFTHREQNQCA 165
Query: 175 DLLAKWARKKKS 186
D L K A K +
Sbjct: 166 DTLVKKAIKSST 177
>AT1G52990.2 | thioredoxin family protein | Chr1:19741201-19743449
REVERSE LENGTH=243 | 201606
Length = 243
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 3/132 (2%)
Query: 56 LKINVDASFTSINVFIGTGLVAHNKEAKFIEATVAVSRAR-NSEEIEAVAIYNGIQWAID 114
+K N DAS +V G G + N + +E + + R EE E A+ IQ
Sbjct: 48 VKCNYDASHHEGDVVSGLGWLIRNSQGTVLECGMGKFQGRMTPEEAECSALIWAIQATSA 107
Query: 115 RAYKYIIIESDNYNLIKHIQDRRHTIMWQSRIHIHKIRKMIPKFDSILFYYTMRSLNSQT 174
Y +I E DN N+ + I + + + ++ I+ IP F S F +T R N
Sbjct: 108 FGYTKVIFEGDNSNVNRLINTKSDNP--RLKHYLDTIKSWIPSFTSTEFIFTHREQNQCA 165
Query: 175 DLLAKWARKKKS 186
D L K A K +
Sbjct: 166 DTLVKKAIKSST 177
>AT1G27870.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr1:9706657-9707298 REVERSE
LENGTH=213 | 201606
Length = 213
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 3/143 (2%)
Query: 38 STKKSDKRRNVDPPIEPYLKINVDASFTSINVFIGTGLVAHNKEAKFIEATVAVSR-ARN 96
++ D P ++K N D SF + +V G V + ++ A A+ R N
Sbjct: 42 GVREEDNHDRWRRPERGWIKCNFDGSFVNGDVKSKAGWVVRDSNGSYLLAGQAIGRKVDN 101
Query: 97 SEEIEAVAIYNGIQWAIDRAYKYIIIESDNYNLIKHIQDRRHTIMWQSRIHIHKIRKMIP 156
+ E E A+ +Q YK + E DN L I + + + I I +
Sbjct: 102 ALESEIQALIISMQHCWSHGYKRVCFEGDNKMLFDLINGSK--VYFGVHNWIRDIHWWLR 159
Query: 157 KFDSILFYYTMRSLNSQTDLLAK 179
KF+SI F + R N+ D+LAK
Sbjct: 160 KFESIHFNWIRRHHNTPADILAK 182