BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g1100.1
(240 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 138 6e-37
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 138 6e-37
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 125 6e-35
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 71 9e-16
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 138 bits (347), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 108/198 (54%), Gaps = 5/198 (2%)
Query: 8 TTPMEPCLKLKKDEGKPLSDATLFRQLVGSLIYLTITRPDIAYSVGIVSQFMEKPCVSHW 67
+ PM+P + G DA +R+L+G L+YL ITR DI+++V +SQF E P ++H
Sbjct: 355 SVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQ 414
Query: 68 NAAKKILRYVKGTLEFGQMYKNCTKFYLSGFVDADWAGDVNDRRSTIGYCFYTGSAAISW 127
A KIL Y+KGT+ G Y + + L F DA + + RRST GYC + G++ ISW
Sbjct: 415 QAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISW 474
Query: 128 CSKKQRTVALSSTEAEYIAATMATQVCMWLKRLMEDINSKMDYSVSIKCDNQSE-----K 182
SKKQ+ V+ SS EAEY A + AT MWL + ++ + + CDN +
Sbjct: 475 KSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATN 534
Query: 183 VLVREKVLDGEIKLHNIR 200
+ E+ E H++R
Sbjct: 535 AVFHERTKHIESDCHSVR 552
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 138 bits (347), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 108/198 (54%), Gaps = 5/198 (2%)
Query: 8 TTPMEPCLKLKKDEGKPLSDATLFRQLVGSLIYLTITRPDIAYSVGIVSQFMEKPCVSHW 67
+ PM+P + G DA +R+L+G L+YL ITR DI+++V +SQF E P ++H
Sbjct: 355 SVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQ 414
Query: 68 NAAKKILRYVKGTLEFGQMYKNCTKFYLSGFVDADWAGDVNDRRSTIGYCFYTGSAAISW 127
A KIL Y+KGT+ G Y + + L F DA + + RRST GYC + G++ ISW
Sbjct: 415 QAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISW 474
Query: 128 CSKKQRTVALSSTEAEYIAATMATQVCMWLKRLMEDINSKMDYSVSIKCDNQSE-----K 182
SKKQ+ V+ SS EAEY A + AT MWL + ++ + + CDN +
Sbjct: 475 KSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATN 534
Query: 183 VLVREKVLDGEIKLHNIR 200
+ E+ E H++R
Sbjct: 535 AVFHERTKHIESDCHSVR 552
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 125 bits (313), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 90/150 (60%), Gaps = 3/150 (2%)
Query: 10 PMEPCLKLKKDEGKPLS---DATLFRQLVGSLIYLTITRPDIAYSVGIVSQFMEKPCVSH 66
PM L LK + + D + FR +VG+L YLT+TRPDI+Y+V IV Q M +P ++
Sbjct: 76 PMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLAD 135
Query: 67 WNAAKKILRYVKGTLEFGQMYKNCTKFYLSGFVDADWAGDVNDRRSTIGYCFYTGSAAIS 126
++ K++LRYVKGT+ G +K + F D+DWAG + RRST G+C + G IS
Sbjct: 136 FDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIIS 195
Query: 127 WCSKKQRTVALSSTEAEYIAATMATQVCMW 156
W +K+Q TV+ SSTE EY A + W
Sbjct: 196 WSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 71.2 bits (173), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 39 IYLTITRPDIAYSVGIVSQFMEKPCVSHWNAAKKILRYVKGTLEFGQMYKNCTKFYLSGF 98
+YLTITRPD+ ++V +SQF + A K+L YVKGT+ G Y + L F
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 99 VDADWAGDVNDRRSTIGYC 117
D+DWA + RRS G+C
Sbjct: 61 ADSDWASCPDTRRSVTGFC 79