BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g1140.1
(180 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 74 1e-16
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 70 6e-14
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 70 6e-14
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 73.9 bits (180), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 74/137 (54%), Gaps = 19/137 (13%)
Query: 46 MQTRAKSGIFK--PKSVLIATKHLISPILLAQYLPPTPSCFSQADKDPKWREAMCEELTA 103
M TR+K+GI K PK L T + P A KDP W +AM EEL A
Sbjct: 1 MLTRSKAGINKLNPKYSLTIT----------TTIKKEPKSVIFALKDPGWCQAMQEELDA 50
Query: 104 LQKTGTWTHP----SQNLKGLQ--NKTKLRW-LSIERYKVRLVSKGFDQQEGIDFTKTFS 156
L + TW +QN+ G + KTKL +++R K RLV+KGF Q+EGI F +T+S
Sbjct: 51 LSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYS 110
Query: 157 SVAKPDTIRVLLNLAVQ 173
V + TIR +LN+A Q
Sbjct: 111 PVVRTATIRTILNVAQQ 127
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 69.7 bits (169), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 7/106 (6%)
Query: 81 PSCFSQADKDPKWREAMCEELTALQKTGTWTH----PSQNLKGLQNKTKLRWLS---IER 133
PS +++A + W AM +E+ A++ T TW P++ G + K+++ S IER
Sbjct: 86 PSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIER 145
Query: 134 YKVRLVSKGFDQQEGIDFTKTFSSVAKPDTIRVLLNLAVQNDWELR 179
YK RLV+KG+ QQEGIDF +TFS V K +++++L ++ ++ L
Sbjct: 146 YKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLH 191
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 69.7 bits (169), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 7/106 (6%)
Query: 81 PSCFSQADKDPKWREAMCEELTALQKTGTWTH----PSQNLKGLQNKTKLRWLS---IER 133
PS +++A + W AM +E+ A++ T TW P++ G + K+++ S IER
Sbjct: 86 PSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIER 145
Query: 134 YKVRLVSKGFDQQEGIDFTKTFSSVAKPDTIRVLLNLAVQNDWELR 179
YK RLV+KG+ QQEGIDF +TFS V K +++++L ++ ++ L
Sbjct: 146 YKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLH 191