BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g1160.1
(694 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 558 0.0
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 558 0.0
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 226 4e-69
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 107 2e-26
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 98 3e-24
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 558 bits (1439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 279/568 (49%), Positives = 375/568 (66%), Gaps = 12/568 (2%)
Query: 136 RSRRPPSHLDDYVC-SNTNIVKYPLENYFSINSFSNSHQQFLSSVLSSTEPTSFTQAMKS 194
R R P++L DY C S ++ + + + S S + FL + + EP+++ +A +
Sbjct: 36 RRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEF 95
Query: 195 PHWKEAMAKEISALEENKTWTITGLPPGKKPIGCKWVYKIKFKSDGSIERYKARLVAKGY 254
W AM EI A+E TW I LPP KKPIGCKWVYKIK+ SDG+IERYKARLVAKGY
Sbjct: 96 LVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGY 155
Query: 255 TQIEGLDYNDTFAPVAKLVTVRVLLSLAAIKGWTLHQLDVNNAFLQGDLHEEVYMKLPPG 314
TQ EG+D+ +TF+PV KL +V+++L+++AI +TLHQLD++NAFL GDL EE+YMKLPPG
Sbjct: 156 TQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPG 215
Query: 315 FSS-QGES----KVCRLHKSLYGLKQASRQWFSKFSSVLIERGFSQSKSDYSLFTFRSHS 369
+++ QG+S VC L KS+YGLKQASRQWF KFS LI GF QS SD++ F + +
Sbjct: 216 YAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITAT 275
Query: 370 TQIYVLVYVDDIIITGNNDHAISQLKIFLNKAFSLKDLDRLQYFLGIEVSRSSQGIFLCQ 429
+ VLVYVDDIII NND A+ +LK L F L+DL L+YFLG+E++RS+ GI +CQ
Sbjct: 276 LFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQ 335
Query: 430 RKYALDILKDSGLTAARPSEFPMEQKLRLSPTDGTPLPDPSVYRRLIGRLLYLTVTRPDI 489
RKYALD+L ++GL +PS PM+ + S G D YRRLIGRL+YL +TR DI
Sbjct: 336 RKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDI 395
Query: 490 TFAVNNLSQFMQTPSQVHLDAAHRVLRYLKGTLDKGVFLSADSSLHITGYCDSDWAGCPS 549
+FAVN LSQF + P H A ++L Y+KGT+ +G+F S+ + + + + D+ + C
Sbjct: 396 SFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKD 455
Query: 550 TRRSTTGYFTMLGSSPLSWKSKKQPTVAKSSAEAEYRALAILTCELQWLKYLLLDFGINH 609
TRRST GY LG+S +SWKSKKQ V+KSSAEAEYRAL+ T E+ WL + +
Sbjct: 456 TRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPL 515
Query: 610 SDPMTVYCDNRAALHIADNPVFHERTKHIEIDCHIVREK-IKDNVIATRFTSTENQLADI 668
S P ++CDN AA+HIA N VFHERTKHIE DCH VRE+ + ++ F + + Q D
Sbjct: 516 SKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DG 573
Query: 669 FTK---PLGAEPFKNIIGKLGVTSIPAL 693
FT+ P+ I+ G+ + AL
Sbjct: 574 FTEYLSPILRGTIMYIVSMFGLAGLEAL 601
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 558 bits (1439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 279/568 (49%), Positives = 375/568 (66%), Gaps = 12/568 (2%)
Query: 136 RSRRPPSHLDDYVC-SNTNIVKYPLENYFSINSFSNSHQQFLSSVLSSTEPTSFTQAMKS 194
R R P++L DY C S ++ + + + S S + FL + + EP+++ +A +
Sbjct: 36 RRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEF 95
Query: 195 PHWKEAMAKEISALEENKTWTITGLPPGKKPIGCKWVYKIKFKSDGSIERYKARLVAKGY 254
W AM EI A+E TW I LPP KKPIGCKWVYKIK+ SDG+IERYKARLVAKGY
Sbjct: 96 LVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGY 155
Query: 255 TQIEGLDYNDTFAPVAKLVTVRVLLSLAAIKGWTLHQLDVNNAFLQGDLHEEVYMKLPPG 314
TQ EG+D+ +TF+PV KL +V+++L+++AI +TLHQLD++NAFL GDL EE+YMKLPPG
Sbjct: 156 TQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPG 215
Query: 315 FSS-QGES----KVCRLHKSLYGLKQASRQWFSKFSSVLIERGFSQSKSDYSLFTFRSHS 369
+++ QG+S VC L KS+YGLKQASRQWF KFS LI GF QS SD++ F + +
Sbjct: 216 YAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITAT 275
Query: 370 TQIYVLVYVDDIIITGNNDHAISQLKIFLNKAFSLKDLDRLQYFLGIEVSRSSQGIFLCQ 429
+ VLVYVDDIII NND A+ +LK L F L+DL L+YFLG+E++RS+ GI +CQ
Sbjct: 276 LFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQ 335
Query: 430 RKYALDILKDSGLTAARPSEFPMEQKLRLSPTDGTPLPDPSVYRRLIGRLLYLTVTRPDI 489
RKYALD+L ++GL +PS PM+ + S G D YRRLIGRL+YL +TR DI
Sbjct: 336 RKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDI 395
Query: 490 TFAVNNLSQFMQTPSQVHLDAAHRVLRYLKGTLDKGVFLSADSSLHITGYCDSDWAGCPS 549
+FAVN LSQF + P H A ++L Y+KGT+ +G+F S+ + + + + D+ + C
Sbjct: 396 SFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKD 455
Query: 550 TRRSTTGYFTMLGSSPLSWKSKKQPTVAKSSAEAEYRALAILTCELQWLKYLLLDFGINH 609
TRRST GY LG+S +SWKSKKQ V+KSSAEAEYRAL+ T E+ WL + +
Sbjct: 456 TRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPL 515
Query: 610 SDPMTVYCDNRAALHIADNPVFHERTKHIEIDCHIVREK-IKDNVIATRFTSTENQLADI 668
S P ++CDN AA+HIA N VFHERTKHIE DCH VRE+ + ++ F + + Q D
Sbjct: 516 SKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DG 573
Query: 669 FTK---PLGAEPFKNIIGKLGVTSIPAL 693
FT+ P+ I+ G+ + AL
Sbjct: 574 FTEYLSPILRGTIMYIVSMFGLAGLEAL 601
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 226 bits (576), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 107/226 (47%), Positives = 153/226 (67%), Gaps = 1/226 (0%)
Query: 372 IYVLVYVDDIIITGNNDHAISQLKIFLNKAFSLKDLDRLQYFLGIEVSRSSQGIFLCQRK 431
+Y+L+YVDDI++TG+++ ++ L L+ FS+KDL + YFLGI++ G+FL Q K
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 432 YALDILKDSGLTAARPSEFPMEQKLRLSPTDGTPLPDPSVYRRLIGRLLYLTVTRPDITF 491
YA IL ++G+ +P P+ KL S PDPS +R ++G L YLT+TRPDI++
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 492 AVNNLSQFMQTPSQVHLDAAHRVLRYLKGTLDKGVFLSADSSLHITGYCDSDWAGCPSTR 551
AVN + Q M P+ D RVLRY+KGT+ G+++ +S L++ +CDSDWAGC STR
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 552 RSTTGYFTMLGSSPLSWKSKKQPTVAKSSAEAEYRALAILTCELQW 597
RSTTG+ T LG + +SW +K+QPTV++SS E EYRALA+ EL W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 107 bits (266), Expect = 2e-26, Method: Composition-based stats.
Identities = 46/99 (46%), Positives = 68/99 (68%)
Query: 184 EPTSFTQAMKSPHWKEAMAKEISALEENKTWTITGLPPGKKPIGCKWVYKIKFKSDGSIE 243
EP S A+K P W +AM +E+ AL NKTW + P + +GCKWV+K K SDG+++
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 244 RYKARLVAKGYTQIEGLDYNDTFAPVAKLVTVRVLLSLA 282
R KARLVAKG+ Q EG+ + +T++PV + T+R +L++A
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 98.2 bits (243), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 58/82 (70%)
Query: 480 LYLTVTRPDITFAVNNLSQFMQTPSQVHLDAAHRVLRYLKGTLDKGVFLSADSSLHITGY 539
+YLT+TRPD+TFAVN LSQF + A ++VL Y+KGT+ +G+F SA S L + +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 540 CDSDWAGCPSTRRSTTGYFTML 561
DSDWA CP TRRS TG+ +++
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82