BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g1180.1
(1285 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 409 e-123
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 409 e-123
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 220 7e-65
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 118 4e-30
AT5G48050.1 | Copia-like polyprotein/retrotransposon | Chr5:1947... 92 2e-19
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 409 bits (1052), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/513 (40%), Positives = 306/513 (59%), Gaps = 7/513 (1%)
Query: 774 EEPQSFIQASKHKHWCDAMTEEFTALMKNNTWSLVPQKPDMNLVDSKWVYRIKQNSDGSV 833
+EP ++ +A + WC AM +E A+ +TW + P+ + KWVY+IK NSDG++
Sbjct: 84 KEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTI 143
Query: 834 LRFKARLVACGYTQQEGIDYSETFSPVVRPETIRSILSLAVTRNWSIRQLDVKNAFLNGD 893
R+KARLVA GYTQQEGID+ ETFSPV + +++ IL+++ N+++ QLD+ NAFLNGD
Sbjct: 144 ERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGD 203
Query: 894 LQESVFMIQPKGFV----NSAFPNHVCRLNKALYGLKQAPRAWHQRFSDCLLQLQFHQSV 949
L E ++M P G+ +S PN VC L K++YGLKQA R W +FS L+ F QS
Sbjct: 204 LDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSH 263
Query: 950 SDPSMFYLRTHSNLIILLLYVDDIIVTGSSLSLLQNIISQLKSKFDMTDMGSLSYFLGME 1009
SD + F T + + +L+YVDDII+ ++ + + + SQLKS F + D+G L YFLG+E
Sbjct: 264 SDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLE 323
Query: 1010 ASRDDTTLTLTQRKYTLDLLHRFGLIDAKPVNTPVITGTKLSKQDGEPLKDPQIYRSLVG 1069
+R + + QRKY LDLL GL+ KP + P+ S G D + YR L+G
Sbjct: 324 IARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIG 383
Query: 1070 ALQYLTLTKPYIAYSVNQVSKFMHSPSTTHFIAAKRILKYLKGTISNGLCFRKATSLPIL 1129
L YL +T+ I+++VN++S+F +P H A +IL Y+KGT+ GL + + +
Sbjct: 384 RLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQ 443
Query: 1130 GYSDADWAGSPDDRRSTTGSCKFLGPNLIIWSSKTQPTVARSSTKAEYRAVAYTSAEIRW 1189
+SDA + D RRST G C FLG +LI W SK Q V++SS +AEYRA+++ + E+ W
Sbjct: 444 VFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMW 503
Query: 1190 LQNLLRELGISSSSPPTIYCDNISTTYLTVNPILHSKTKHAAIDFFFVREQ-VKSGNLRV 1248
L REL + S P ++CDN + ++ N + H +TKH D VRE+ V L
Sbjct: 504 LAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSY 563
Query: 1249 HYLPGDDQIADIFTKGLSSSRFNDLRFKLSLVG 1281
+ D+Q D FT+ LS + + +S+ G
Sbjct: 564 SFQAYDEQ--DGFTEYLSPILRGTIMYIVSMFG 594
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 409 bits (1052), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/513 (40%), Positives = 306/513 (59%), Gaps = 7/513 (1%)
Query: 774 EEPQSFIQASKHKHWCDAMTEEFTALMKNNTWSLVPQKPDMNLVDSKWVYRIKQNSDGSV 833
+EP ++ +A + WC AM +E A+ +TW + P+ + KWVY+IK NSDG++
Sbjct: 84 KEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTI 143
Query: 834 LRFKARLVACGYTQQEGIDYSETFSPVVRPETIRSILSLAVTRNWSIRQLDVKNAFLNGD 893
R+KARLVA GYTQQEGID+ ETFSPV + +++ IL+++ N+++ QLD+ NAFLNGD
Sbjct: 144 ERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGD 203
Query: 894 LQESVFMIQPKGFV----NSAFPNHVCRLNKALYGLKQAPRAWHQRFSDCLLQLQFHQSV 949
L E ++M P G+ +S PN VC L K++YGLKQA R W +FS L+ F QS
Sbjct: 204 LDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSH 263
Query: 950 SDPSMFYLRTHSNLIILLLYVDDIIVTGSSLSLLQNIISQLKSKFDMTDMGSLSYFLGME 1009
SD + F T + + +L+YVDDII+ ++ + + + SQLKS F + D+G L YFLG+E
Sbjct: 264 SDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLE 323
Query: 1010 ASRDDTTLTLTQRKYTLDLLHRFGLIDAKPVNTPVITGTKLSKQDGEPLKDPQIYRSLVG 1069
+R + + QRKY LDLL GL+ KP + P+ S G D + YR L+G
Sbjct: 324 IARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIG 383
Query: 1070 ALQYLTLTKPYIAYSVNQVSKFMHSPSTTHFIAAKRILKYLKGTISNGLCFRKATSLPIL 1129
L YL +T+ I+++VN++S+F +P H A +IL Y+KGT+ GL + + +
Sbjct: 384 RLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQ 443
Query: 1130 GYSDADWAGSPDDRRSTTGSCKFLGPNLIIWSSKTQPTVARSSTKAEYRAVAYTSAEIRW 1189
+SDA + D RRST G C FLG +LI W SK Q V++SS +AEYRA+++ + E+ W
Sbjct: 444 VFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMW 503
Query: 1190 LQNLLRELGISSSSPPTIYCDNISTTYLTVNPILHSKTKHAAIDFFFVREQ-VKSGNLRV 1248
L REL + S P ++CDN + ++ N + H +TKH D VRE+ V L
Sbjct: 504 LAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSY 563
Query: 1249 HYLPGDDQIADIFTKGLSSSRFNDLRFKLSLVG 1281
+ D+Q D FT+ LS + + +S+ G
Sbjct: 564 SFQAYDEQ--DGFTEYLSPILRGTIMYIVSMFG 594
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 220 bits (560), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 112/226 (49%), Positives = 153/226 (67%), Gaps = 1/226 (0%)
Query: 964 IILLLYVDDIIVTGSSLSLLQNIISQLKSKFDMTDMGSLSYFLGMEASRDDTTLTLTQRK 1023
+ LLLYVDDI++TGSS +LL +I QL S F M D+G + YFLG++ + L L+Q K
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 1024 YTLDLLHRFGLIDAKPVNTPVITGTKLSKQDGEPLKDPQIYRSLVGALQYLTLTKPYIAY 1083
Y +L+ G++D KP++TP+ S + DP +RS+VGALQYLTLT+P I+Y
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAK-YPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 1084 SVNQVSKFMHSPSTTHFIAAKRILKYLKGTISNGLCFRKATSLPILGYSDADWAGSPDDR 1143
+VN V + MH P+ F KR+L+Y+KGTI +GL K + L + + D+DWAG R
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 1144 RSTTGSCKFLGPNLIIWSSKTQPTVARSSTKAEYRAVAYTSAEIRW 1189
RSTTG C FLG N+I WS+K QPTV+RSST+ EYRA+A T+AE+ W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 118 bits (295), Expect = 4e-30, Method: Composition-based stats.
Identities = 63/129 (48%), Positives = 84/129 (65%), Gaps = 6/129 (4%)
Query: 747 MITRSRDGTRK--PKIFLTTDAAHEYPQLEEPQSFIQASKHKHWCDAMTEEFTALMKNNT 804
M+TRS+ G K PK LT + +EP+S I A K WC AM EE AL +N T
Sbjct: 1 MLTRSKAGINKLNPKYSLTITTTIK----KEPKSVIFALKDPGWCQAMQEELDALSRNKT 56
Query: 805 WSLVPQKPDMNLVDSKWVYRIKQNSDGSVLRFKARLVACGYTQQEGIDYSETFSPVVRPE 864
W LVP + N++ KWV++ K +SDG++ R KARLVA G+ Q+EGI + ET+SPVVR
Sbjct: 57 WILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTA 116
Query: 865 TIRSILSLA 873
TIR+IL++A
Sbjct: 117 TIRTILNVA 125
>AT5G48050.1 | Copia-like polyprotein/retrotransposon |
Chr5:19472661-19473770 REVERSE LENGTH=369 | 201606
Length = 369
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 30/284 (10%)
Query: 37 LVSIRLDNTNYLLWKSQLLPILHSQDLFKFVNGTFPPPPEFLTTYNDSSSSSIPNPDFVY 96
V++ L+ NY +W+ + S + ++G+ P P +T
Sbjct: 23 FVTLDLNKLNYDVWRELFETLCLSFGVLGHIDGSSTPTP--MTEKR-------------- 66
Query: 97 WYRVDQMLLSWLNATLTEPILAQVLGL-TSSRAVWESLERSFSSFNSARLLNLKLQLQTS 155
W D ++ W+ T+T+ +L ++ + ++R +W SLE F AR L + +L+T+
Sbjct: 67 WKERDGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRTT 126
Query: 156 KKGSVSISEYLLRLKSLADSLAAIGHSISDDELVLIILSGLGSDYESFVTSITTRSIPPT 215
+S+ EY +LKSL+D L + ISD LV+ +L+GL Y+ + I +S P+
Sbjct: 127 TIDDLSVHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFPS 186
Query: 216 YSELHSQLLTHEFR------LQLLQSQSPSQTALFSQTPQTNTPFSQSTPPNYSFVPRGP 269
++E S LL E R L + PS + + P+ + Q N S + RG
Sbjct: 187 FTEARSMLLMEESRLSNKSKSSLSHTNHPSLSNVLFTVPRQQERYPQEYHNNNSNMGRG- 245
Query: 270 RGRSYGRGGGRASARGSYSNRGKFRSNS--SSVLGKP--PDNYP 309
R + RGGG S+ G Y+N +R N + + G P P YP
Sbjct: 246 RSKKKNRGGG--SSDGRYNNNNNWRLNQPPTWIYGPPQSPYMYP 287