BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g1310.1
(234 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G05850.1 | MuDR family transposase | Chr3:1743537-1745943 REV... 45 2e-05
>AT3G05850.1 | MuDR family transposase | Chr3:1743537-1745943
REVERSE LENGTH=777 | 201606
Length = 777
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 150 TGMMWPTIHEARSFMRSYAISHHFTFKQVKNEKKMLKYRCKELSCGWSVYIGQMSDGNTY 209
G + + E R +R YAI++ F F+ KN+ + +CK C W ++ ++S
Sbjct: 206 VGQRFKNVGEFREALRKYAIANQFGFRYKKNDSHRVTVKCKAEGCPWRIHASRLSTTQLI 265
Query: 210 RVGKKCNFVHTC 221
+ KK N HTC
Sbjct: 266 CI-KKMNPTHTC 276