BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g1370.1
(513 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G19940.1 | F-box and associated interaction domains-containin... 76 1e-14
AT1G13200.1 | F-box and associated interaction domains-containin... 76 2e-14
AT1G47790.1 | F-box and associated interaction domains-containin... 70 2e-12
AT1G50870.1 | F-box and associated interaction domains-containin... 69 2e-12
AT2G40920.2 | F-box and associated interaction domains-containin... 69 3e-12
>AT4G19940.1 | F-box and associated interaction domains-containing
protein | Chr4:10806195-10807430 FORWARD LENGTH=411 |
201606
Length = 411
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 174/414 (42%), Gaps = 80/414 (19%)
Query: 92 ILCEILSRVQVDSLIRLKCVCKSWRSLIEQDSKFINLHRTRSKPRLLIVVPKPIRRTHSD 151
++ EIL+R+ SL+R K V K W SLI + L + S PRL + + + SD
Sbjct: 39 LVIEILTRLPAKSLMRFKSVSKLWSSLICSRNFTNRLLKLSSPPRLFMCL------SSSD 92
Query: 152 SGKTNTIGINTRTRDLCLTADLDCQSRRASITTVCKTRSWIYNSISKPVNGLFCFIDSEC 211
+ T+ ++ L D D + I IS GL C +
Sbjct: 93 NSHLKTVLLS-----LSSPPDSDITMSSSVIDQDLTMPGMKGYQISHVFRGLMCLVKKS- 146
Query: 212 LYAVRICNIGTRE--VTPWIQSTLIPKEEEKNNRYEWLCWYEGSFQLGFDPVTNEHKLVC 269
+ +I N TR+ V P I+ + I EE K+ + + +G DPV +++K+VC
Sbjct: 147 --SAQIYNTTTRQLVVLPDIEESTILAEEHKSKKI--------MYHIGHDPVYDQYKVVC 196
Query: 270 LWYIDTKEDEANGYSLCE---ILTV---GDNVWRRIE-DVPPYEVQGETSIYVNGSIY-- 320
+ + DE Y+ +L + G WR+I PP+ G+ + ++G ++
Sbjct: 197 I--VSRASDEVEEYTFLSEHWVLLLEGEGSRRWRKISCKYPPHVPLGQ-GLTLSGRMHYL 253
Query: 321 -WITISVMRLYLGFNNDHVCIVVFDVGSEKFRTITIPDFVLNEVRDHYKGYIIGMDEGSH 379
W+ +S D+ +V+FD SE+F + +P + +
Sbjct: 254 AWVRVS----------DNRVLVIFDTHSEEFSMLQVPGDIFWK----------------- 286
Query: 380 LYADLLQVGCGRIAMLIRMS---DYIVKLWIFNDNKDEIYSNWTEAMTIKLPFRWGGNNR 436
Y LL+ G G+IA+L + +++LW+ D + + W+ + + P + N
Sbjct: 287 -YNGLLEYG-GKIAILNYTKVDIEGVMELWVVEDEEKNL---WSSKILVVNPLQLQMVNS 341
Query: 437 VHFHTIEGI--DDQIILRTYRRNMEDFTIEEDVSYYRYNWKENSFTKFKIRGIP 488
+ T+ G + ++IL + F I Y+ ++N K +I+G P
Sbjct: 342 IISLTVLGTTRNGEVILVPGPEDKTVFNI------LLYDLQKNHIRKIEIKGGP 389
>AT1G13200.1 | F-box and associated interaction domains-containing
protein | Chr1:4507221-4508528 REVERSE LENGTH=435 |
201606
Length = 435
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 117/280 (41%), Gaps = 44/280 (15%)
Query: 92 ILCEILSRVQVDSLIRLKCVCKSWRSLIEQDSKFINLHRTRSKPRLLIVVPKPIRRTHSD 151
+L EI R V +LIRLK + K WRS IE S F H T +K + D
Sbjct: 47 VLEEIFLRFPVKALIRLKSLSKQWRSTIESRS-FEERHLTIAK------------KAFVD 93
Query: 152 SGKTNTIGINTRTRDLCLTADLDCQSR-----RASITTVCKTR------SWIYNSISKPV 200
K +G R + D D R AS+ + + +WIY IS+
Sbjct: 94 HPKVMLVGEEDPIRGTGIRPDTDIGFRLFCLESASLLSFTRLNFPQGFFNWIY--ISESC 151
Query: 201 NGLFCFIDSECLYAVRICNIGTR--EVTPWIQSTLIPKEEEKNNRYEWLCWYEGSFQLGF 258
+GLFC I S ++V + N TR + P ++ + R EW + F L F
Sbjct: 152 DGLFC-IHSPKSHSVYVVNPATRWLRLLPPAGFQILIHKFNPTER-EWNVVMKSIFHLAF 209
Query: 259 DPVTNEHKLVCLW----YIDTKEDEANGYSLCEILTVGDNVWRRIEDVPPYEV-QGETSI 313
T+ +KLV L+ YI G + CEI N WR + P +++ +
Sbjct: 210 VKATD-YKLVWLYNCDKYIVDASSPNVGVTKCEIFDFRKNAWRYLACTPSHQIFYYQKPA 268
Query: 314 YVNGSIYWITISVMRLYLGFNNDHVCIVVFDVGSEKFRTI 353
NGS+YW T N+ + +V FD+ +E FR +
Sbjct: 269 SANGSVYWFTEPY--------NERIEVVAFDIQTETFRLL 300
>AT1G47790.1 | F-box and associated interaction domains-containing
protein | Chr1:17600004-17601173 REVERSE LENGTH=389 |
201606
Length = 389
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 141/340 (41%), Gaps = 83/340 (24%)
Query: 92 ILCEILSRVQVDSLIRLKCVCKSWRSLIEQDSKFINLHRTRSKPR--LLIVVPKP----- 144
+ EIL R+ V S++R +CV K W S+I D FI + T+S R LL +
Sbjct: 29 LASEILLRLPVKSVVRFRCVSKLWSSII-TDPYFIKTYETQSSTRQSLLFCFKQSDKLFV 87
Query: 145 --IRRTHSDSGKTNTIGINTRTRDLCLTADLDCQSRRASITTVCKTRSWIYNSISKPVNG 202
I + H DS ++ I+ L + + Y S ++ V+G
Sbjct: 88 FSIPKHHYDSNSSSQAAIDRFQVKL--------------------PQEFSYPSPTESVHG 127
Query: 203 LFCFIDSECLYAVRICNIGTREVTPWIQSTLIPKEEEKNNRYEWLCWYEGSFQLGFDPVT 262
L CF L V + N R Q +PK + W E + LG+DP+
Sbjct: 128 LICF---HVLATVIVWNPSMR------QFLTLPKPRKS--------WKELTVFLGYDPIE 170
Query: 263 NEHKLVCLWYIDTKEDEANGYSLCEILTVG--DNVWRRIEDVPPYEVQGET-SIYVNGSI 319
+HK+VCL T ++ C++LT+G WR ++ + +T + G +
Sbjct: 171 GKHKVVCLPRNRTCDE-------CQVLTLGSAQKSWRTVKTKHKHRSTNDTWGRCIKGVV 223
Query: 320 YWITISVMRLYLGFNNDHVCIVVFDVGSEKFRTITIP-DFVLNEVRDHYKGYIIGMDEGS 378
Y+I ++ CI+ F V SEKF I +P + + +V +Y+G + +D+
Sbjct: 224 YYIAYV-------YHTRVWCIMSFHVKSEKFDMIKLPLENIYRDVMINYEGRLACVDK-- 274
Query: 379 HLYADLLQVGCGRIAMLIRMSDYIVKLWIFNDNKDEIYSN 418
L +++ ++LWI D + +S+
Sbjct: 275 ----------------LYTLNNDGIRLWILEDAEKHKWSS 298
>AT1G50870.1 | F-box and associated interaction domains-containing
protein | Chr1:18855147-18856337 FORWARD LENGTH=396 |
201606
Length = 396
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 158/371 (42%), Gaps = 75/371 (20%)
Query: 57 VKKKEKKTVRTHKIQKIKKNKGSSNGGITIRNHEPILCEILSRVQVDSLIRLKCVCKSWR 116
++++E+ T R H+ ++ K+ S T+ ++ EIL R+ V S++R +CV K W
Sbjct: 1 MEQREENTERIHR-ERRKRQSSSIPKTTTLLCPLDLILEILLRLPVKSVLRFRCVSKLWL 59
Query: 117 SLIEQDSKFINLHRTRS--KPRLLIVVPKPIRRTHSDSGKTNTIGINTRTRDLCLTADLD 174
S D F N + RS +P LL+ + + T
Sbjct: 60 S-TTTDPYFTNSYEARSSTRPSLLMF-------------------FKNKDKLFVFTFPHH 99
Query: 175 CQSRRASITTVCKTRSWIYNSISKPVNGLFCFIDSECLYAVRICNIGTREV--TPWIQST 232
Q+ + + + S+ I P CF +E ++ + I T+ + P ++
Sbjct: 100 NQNSKETHSYSQHVDSY---HIKYP--KYCCFPFTESVHGLISFRISTKPIIWNPTMRQF 154
Query: 233 LIPKEEEKNNRYEWLCWYEGSFQLGFDPVTNEHKLVCLWYIDTKEDEANGYSLCEILTVG 292
LI + EK+ W S LG+DPV +HKL+C+ +T ++ C +LT+G
Sbjct: 155 LILPKPEKS-------WKGLSVFLGYDPVEGKHKLMCMNRDNTSDE-------CRVLTLG 200
Query: 293 --DNVWRRIE-DVPPYEVQGETSIYVNGSIYWITISVMRLYLGFNNDHVCIVVFDVGSEK 349
WRRI+ ++ + +NG IY+ +GF ++ I+ F+V SEK
Sbjct: 201 SAQEKWRRIKSNLKHRSILRYYGQCINGVIYYQAYIDQ---MGFISNPT-IMSFEVRSEK 256
Query: 350 FRTITIPDFVLNEVRDHYKGYIIGMDEGSHLYADLLQVGCGRIAMLIRMSDYI---VKLW 406
F TIT+P GS +A++L GR+A + D + + LW
Sbjct: 257 FDTITLPS-------------------GS--FANMLIPYQGRLACVNNTMDDVNGGITLW 295
Query: 407 IFNDNKDEIYS 417
D + I+S
Sbjct: 296 TLEDAEKHIWS 306
>AT2G40920.2 | F-box and associated interaction domains-containing
protein | Chr2:17072586-17073719 REVERSE LENGTH=377 |
201606
Length = 377
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 169/415 (40%), Gaps = 82/415 (19%)
Query: 95 EILSRVQVDSLIRLKCVCKSWRSLIEQDSKFINL---HRTRSKPRLLIVVPKPIRRTHSD 151
EIL R + SL R KCV K W SLI F NL TR +PRL + + D
Sbjct: 2 EILMRFPLTSLTRFKCVSKQWSSLIS-SRYFCNLLYTTVTRQQPRLYMCL-------KDD 53
Query: 152 SGKTNTIGINTRTRD----LCLTADLDCQSRRASITTVCKTRSWIYNSISKPVNGLFCFI 207
G + I++ +R + + DL V V GL CF
Sbjct: 54 GGHRVLLSISSPSRGNTSFVVVEQDLSIPGMGGFFLNV--------------VRGLMCFS 99
Query: 208 DSECLYAVRICNIGTREV--TPWIQSTLIPKEEEKNNRYEWLCWYEGSFQLGFDPVTNEH 265
+ RI N T+++ P I+S ++ ++ + + + +G DPV++++
Sbjct: 100 RRK---KARIYNPSTKQLLTLPAIKSDIVAQQGQTK--------HHPRYYIGHDPVSDQY 148
Query: 266 KLVCLWYIDT---KEDEANGYSLCEILTVGDNVWRRIEDVPPYEVQGETSIYVNGSIYWI 322
KLVC I + + L G + W+++ + Y ++ + S
Sbjct: 149 KLVCTVAISSLLPRLGNLKSEHWVFALEAGGS-WKKVVPLENYRHHAPSTEGRSTS---- 203
Query: 323 TISVMRLYLGFNNDHVCIVV-FDVGSEKFRTITIP-DFVLNEVRDHYKGYIIGMDEGSHL 380
SV+R Y+ + +++ C+VV FD+ SE+ I +P + L+EV +
Sbjct: 204 -GSVVR-YMAWPDNYNCVVVSFDIRSEQLTIIPVPREIHLDEVV-----------PAVTM 250
Query: 381 YADLLQVGCGRIAMLIRMS---DYIVKLWIFNDNKDEIYSNWTEAMTIKLPFRWGGNNRV 437
ADL++ G G+IA+ + + LW+ D S W++ + P
Sbjct: 251 MADLIEYG-GKIAIFYHTNLKDEGSADLWVLEDTGK---SEWSKKTLVLQP--------C 298
Query: 438 HFHTIEGIDDQIILRTYRRNMEDFTIEEDVSYY--RYNWKENSFTKFKIRGIPSS 490
H +E I+ + T + +E +Y YN + N K +I+G+P S
Sbjct: 299 QRHLVEDIELIVKGTTQDGKVILAPVEMHSRFYILYYNLQSNDLRKVEIKGVPDS 353