BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g1390.1
(456 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G19940.1 | F-box and associated interaction domains-containin... 89 4e-19
AT1G50870.1 | F-box and associated interaction domains-containin... 77 4e-15
AT1G32420.1 | F-box and associated interaction domains-containin... 73 7e-14
AT4G38870.1 | F-box and associated interaction domains-containin... 73 1e-13
AT1G47790.1 | F-box and associated interaction domains-containin... 69 1e-12
>AT4G19940.1 | F-box and associated interaction domains-containing
protein | Chr4:10806195-10807430 FORWARD LENGTH=411 |
201606
Length = 411
Score = 89.4 bits (220), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 184/429 (42%), Gaps = 73/429 (17%)
Query: 36 ILCEILSRVRVDSLIRFKCVCKSWRSLIEQDSKFINLHRTRSKPRLLIVVPKPIRRTHSD 95
++ EIL+R+ SL+RFK V K W SLI + L + S PRL + + + SD
Sbjct: 39 LVIEILTRLPAKSLMRFKSVSKLWSSLICSRNFTNRLLKLSSPPRLFMCL------SSSD 92
Query: 96 SGKTNTIGINTRTHDLCLTGDLDCQRRRASITTVCKAPSWIYNSISKPVNGLFCFIDSGC 155
+ T+ ++ L D D + I P IS GL C +
Sbjct: 93 NSHLKTVLLS-----LSSPPDSDITMSSSVIDQDLTMPGMKGYQISHVFRGLMCLVKKS- 146
Query: 156 LYAVRIYNIGTRE--VTPWIRSTLIPKEEEKNDRYEWLCWYEGSFQLGFDPVTNEHKLVC 213
+ +IYN TR+ V P I + I EE K+ + + +G DPV +++K+VC
Sbjct: 147 --SAQIYNTTTRQLVVLPDIEESTILAEEHKSKKI--------MYHIGHDPVYDQYKVVC 196
Query: 214 LSYIDREKDEANGYSLCE---ILTV---GDNVWRRIE-DVPPCEVLGETSTYVNGSIYWI 266
+ + R DE Y+ +L + G WR+I PP LG+ T ++G ++++
Sbjct: 197 I--VSRASDEVEEYTFLSEHWVLLLEGEGSRRWRKISCKYPPHVPLGQGLT-LSGRMHYL 253
Query: 267 PITVVRLYLGFNDAHVSIVVFDVGSEKFRTITVPDFVLKEVCDHYKGYIIGKDDGLDRYA 326
++ +D V +V+FD SE+F + VP G I K +GL Y
Sbjct: 254 A------WVRVSDNRV-LVIFDTHSEEFSMLQVP------------GDIFWKYNGLLEYG 294
Query: 327 DLLQVDGRVAILIRMS---DYIVKLWIFDDNKDEIYTNWTEAMTIKLPFRWGGNRRVHFH 383
G++AIL + +++LW+ +D + + W+ + + P + +
Sbjct: 295 ------GKIAILNYTKVDIEGVMELWVVEDEEKNL---WSSKILVVNPLQLQMVNSIISL 345
Query: 384 TIEGI--DDQIILRTYRRNMEDFTIEEDVSYYCYNWKEDSFNKFKIRGIPSSIRNLISAK 441
T+ G + ++IL + F I Y+ +++ K +I+G P N I
Sbjct: 346 TVLGTTRNGEVILVPGPEDKTVFNI------LLYDLQKNHIRKIEIKGGPDRYLNNIWEV 399
Query: 442 LFATSVETL 450
+ VE L
Sbjct: 400 VGMDDVENL 408
>AT1G50870.1 | F-box and associated interaction domains-containing
protein | Chr1:18855147-18856337 FORWARD LENGTH=396 |
201606
Length = 396
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 159/367 (43%), Gaps = 68/367 (18%)
Query: 1 MKKKGKKIVRTHKKKKIKKNKGSSNGGITIGNHEPILCEILSRVRVDSLIRFKCVCKSWR 60
M+++ + R H++++ K+ S T+ ++ EIL R+ V S++RF+CV K W
Sbjct: 1 MEQREENTERIHRERR-KRQSSSIPKTTTLLCPLDLILEILLRLPVKSVLRFRCVSKLWL 59
Query: 61 SLIEQDSKFINLHRTRS--KPRLLIVVPKPIRRTHSDSGKTNTIGINTRTHDLCLTGDLD 118
S D F N + RS +P LL+ + + + T H + +
Sbjct: 60 S-TTTDPYFTNSYEARSSTRPSLLMFF-----------KNKDKLFVFTFPHHNQNSKETH 107
Query: 119 CQRRRASITTVCKAPSWIYNSISKPVNGLFCFIDSGCLYAVRIYNIGTREV--TPWIRST 176
+ + K P + ++ V+GL F I T+ + P +R
Sbjct: 108 SYSQHVDSYHI-KYPKYCCFPFTESVHGLISF------------RISTKPIIWNPTMRQF 154
Query: 177 LIPKEEEKNDRYEWLCWYEGSFQLGFDPVTNEHKLVCLSYIDREKDEANGYSLCEILTVG 236
LI + EK+ W S LG+DPV +HKL+C++ D DE C +LT+G
Sbjct: 155 LILPKPEKS-------WKGLSVFLGYDPVEGKHKLMCMNR-DNTSDE------CRVLTLG 200
Query: 237 --DNVWRRIE-DVPPCEVLGETSTYVNGSIYWIPITVVRLYLGFNDAHVSIVVFDVGSEK 293
WRRI+ ++ +L +NG IY+ +GF ++ +I+ F+V SEK
Sbjct: 201 SAQEKWRRIKSNLKHRSILRYYGQCINGVIYYQAYIDQ---MGF-ISNPTIMSFEVRSEK 256
Query: 294 FRTITVPDFVLKEVCDHYKGYIIGKDDGLDRYADLLQVDGRVAILIRMSDYIVKLWIFDD 353
F TIT+P + Y+G + ++ +D V+G + LW +D
Sbjct: 257 FDTITLPSGSFANMLIPYQGRLACVNNTMD------DVNGGIT-----------LWTLED 299
Query: 354 NKDEIYT 360
+ I++
Sbjct: 300 AEKHIWS 306
>AT1G32420.1 | F-box and associated interaction domains-containing
protein | Chr1:11701995-11702903 FORWARD LENGTH=302 |
201606
Length = 302
Score = 72.8 bits (177), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 132/307 (42%), Gaps = 59/307 (19%)
Query: 14 KKKIKKNKGSSNGGITIGNHEPILCEILSRVRVDSLIRFKCVCKSWRSLIEQDSKFINLH 73
++KI + S N I + + EIL ++ SL+RF+CV K W S+I FI+
Sbjct: 23 RRKISAGEKSGNVNIPLD----LTVEILKKLPAKSLLRFQCVSKQWLSIISSRRDFIDSI 78
Query: 74 RTRSKPRLLIVVPKPIRRTHSDSGKTNTIGINTRTHDLCLTGDLDCQRRRASITTVCKAP 133
TRS L P+ I+ + H + + S+TT +A
Sbjct: 79 VTRS---LTQPPPRDIKLIFHHQ------VLYPGPHFFIFSSTYPQNTDKESLTT--RAS 127
Query: 134 SWIYNSISKPVNGLFCFIDSGCLYAVRIYNIGTREVTPWIRSTLIPKEEEKNDRYEWLCW 193
S+ Y V GL C S C V IYN TR+ +P +RY+++
Sbjct: 128 SYHY------VRGLICCW-SHCPTTVDIYNPTTRQY------YTVP----DTNRYQYI-- 168
Query: 194 YEGSFQLGFDPVTNEHKLVCLSYIDREKDEANGYSLCEILTVGDNV---WRRIEDVPPCE 250
E F G+DPV N++K++ L E+ S C++ TVGD + WR I+ +
Sbjct: 169 -ETCF-FGYDPVENQYKVMVLPKYYMEE------SPCQVFTVGDPIEKPWRDIQGI-GVH 219
Query: 251 VLGETSTYVNGSIYWIPITVVRLYLGFND--AHVSIVVFDVGSEKFRTITVPDFVLKEVC 308
L + + +NG IY Y N+ + +V FDV SEKF + P + C
Sbjct: 220 FLLKDAVCINGVIY---------YQATNEYGSTYFLVSFDVRSEKFNHVKAPKILTDHPC 270
Query: 309 D--HYKG 313
+Y+G
Sbjct: 271 TLINYQG 277
>AT4G38870.1 | F-box and associated interaction domains-containing
protein | Chr4:18132583-18133863 REVERSE LENGTH=426 |
201606
Length = 426
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 151/338 (44%), Gaps = 58/338 (17%)
Query: 36 ILCEILSRVRVDSLIRFKCVCKSWRSLIEQDSKFINLHRTRS--KPRLLIVVPKPIRRTH 93
++ EIL ++ + LIRF CV K W S+I +D F+ L S +P+ L+ V R
Sbjct: 57 LIMEILKKLSLKPLIRFLCVSKLWASII-RDPYFMKLFLNESLKRPKSLVFV----FRAQ 111
Query: 94 SDSGKTNTIGINTRTHDLCLTGDLDCQRRRASITTVCKAPSWIYNSISKPVNGLFCFIDS 153
S +++ + + T ++ + +SIT + +IS V+GL C+
Sbjct: 112 SLGSIFSSVHLKS-TREISSSSS---SSSASSITYHVTCYTQQRMTISPSVHGLICY--- 164
Query: 154 GCLYAVRIYNIGTREVTPWIRSTLIPKEEEKNDRYEWLCWYEGSFQLGFDPVTNEHKLVC 213
G ++ IYN TR RS +PK + +G+DP+ +K+VC
Sbjct: 165 GPPSSLVIYNPCTR------RSITLPKIKAGRRAINQY--------IGYDPLDGNYKVVC 210
Query: 214 LSY-IDREKDEANGYSLCEILTVG--DNVWRRIEDVPPCEVLGETSTYVNGSIYWIPITV 270
++ + ++ ++LT+G D+ WR I D+ P +NG +Y+
Sbjct: 211 ITRGMPMLRNRRGLAEEIQVLTLGTRDSSWRMIHDIIPPHSPVSEELCINGVLYY----- 265
Query: 271 VRLYLGFNDAHVSIVVFDVGSEKFRTITVPDFVLKEVCDHYKGYIIGKDDGLDRYADLLQ 330
R ++G +I+ FDV SEKF I VP C+ ++ L +
Sbjct: 266 -RAFIGTKLNESAIMSFDVRSEKFDLIKVP-------CN------------FRSFSKLAK 305
Query: 331 VDGRVAILI--RMSDYIVKLWIFDDNKDEIYTNWTEAM 366
+G++A++ + + I+ LWI +D + ++ T A+
Sbjct: 306 YEGKLAVIFYEKKTSGIIGLWILEDASNGEWSKKTFAL 343
>AT1G47790.1 | F-box and associated interaction domains-containing
protein | Chr1:17600004-17601173 REVERSE LENGTH=389 |
201606
Length = 389
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 135/322 (41%), Gaps = 64/322 (19%)
Query: 36 ILCEILSRVRVDSLIRFKCVCKSWRSLIEQDSKFINLHRTRSKPRLLIVVPKPIRRTHSD 95
+ EIL R+ V S++RF+CV K W S+I D FI + T+S R ++
Sbjct: 29 LASEILLRLPVKSVVRFRCVSKLWSSII-TDPYFIKTYETQSSTRQSLLF------CFKQ 81
Query: 96 SGKTNTIGINTRTHDLCLTGDLDCQRRRASITTVCKAPSWIYNSISKPVNGLFCFIDSGC 155
S K I +D + R + + + Y S ++ V+GL CF
Sbjct: 82 SDKLFVFSIPKHHYDSNSSSQAAIDRFQVKL-----PQEFSYPSPTESVHGLICF---HV 133
Query: 156 LYAVRIYNIGTREVTPWIRSTLIPKEEEKNDRYEWLCWYEGSFQLGFDPVTNEHKLVCLS 215
L V ++N R+ +PK + W E + LG+DP+ +HK+VCL
Sbjct: 134 LATVIVWNPSMRQF------LTLPKPRKS--------WKELTVFLGYDPIEGKHKVVCLP 179
Query: 216 YIDREKDEANGYSLCEILTVG--DNVWRRIEDVPPCEVLGET-STYVNGSIYWIPITVVR 272
+R DE C++LT+G WR ++ +T + G +Y+I
Sbjct: 180 R-NRTCDE------CQVLTLGSAQKSWRTVKTKHKHRSTNDTWGRCIKGVVYYIAYV--- 229
Query: 273 LYLGFNDAHVSIVVFDVGSEKFRTITVP-DFVLKEVCDHYKGYIIGKDDGLDRYADLLQV 331
++ I+ F V SEKF I +P + + ++V +Y+G + D
Sbjct: 230 ----YHTRVWCIMSFHVKSEKFDMIKLPLENIYRDVMINYEGRLACVDK----------- 274
Query: 332 DGRVAILIRMSDYIVKLWIFDD 353
L +++ ++LWI +D
Sbjct: 275 ------LYTLNNDGIRLWILED 290