BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g1440.1
(524 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G50030.2 | target of rapamycin | Chr1:18522626-18539619 REVER... 572 0.0
AT1G50030.1 | target of rapamycin | Chr1:18522626-18539619 REVER... 572 0.0
AT5G40820.2 | Ataxia telangiectasia-mutated and RAD3-like protei... 84 1e-16
AT5G40820.4 | Ataxia telangiectasia-mutated and RAD3-like protei... 84 1e-16
AT5G40820.3 | Ataxia telangiectasia-mutated and RAD3-like protei... 84 1e-16
>AT1G50030.2 | target of rapamycin | Chr1:18522626-18539619 REVERSE
LENGTH=2454 | 201606
Length = 2454
Score = 572 bits (1474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 276/325 (84%), Positives = 302/325 (92%), Gaps = 4/325 (1%)
Query: 2 ALQKGFAYVNIDTWLVVLPQIIARIHSNNHAVRELIQSLLVRIGRGHPQALMYPLLVACK 61
AL+ GF++VNI+TWLVVLPQIIARIHSNN AVRELIQSLL+RIG HPQALMYPLLVACK
Sbjct: 1800 ALKTGFSHVNINTWLVVLPQIIARIHSNNRAVRELIQSLLIRIGENHPQALMYPLLVACK 1859
Query: 62 SISNLRKAAAQEVVERVRQHSGVLVDQAQLVSKELIRVAILWHEMWHEALEEASRLYFGE 121
SISNLR+AAAQEVV++VRQHSG LVDQAQLVS ELIRVAILWHEMWHEALEEASRLYFGE
Sbjct: 1860 SISNLRRAAAQEVVDKVRQHSGALVDQAQLVSHELIRVAILWHEMWHEALEEASRLYFGE 1919
Query: 122 HNIEGMLKVLEPLHEMLEEG----AHTLKEQTFIQAYGRELLEAYECCMKYKKTGKDAEL 177
HNIEGMLKVLEPLH+ML+EG + T++E+ FI+AY EL EA+ECC YK TGKDAEL
Sbjct: 1920 HNIEGMLKVLEPLHDMLDEGVKKDSTTIQERAFIEAYRHELKEAHECCCNYKITGKDAEL 1979
Query: 178 TQAWDLYYHVFRRIDKQLPSLTTLDLQSVSPELLNCRNLELAVPGTYRAGSPVVTIASFA 237
TQAWDLYYHVF+RIDKQL SLTTLDL+SVSPELL CR+LELAVPGTYRA +PVVTI+SF+
Sbjct: 1980 TQAWDLYYHVFKRIDKQLASLTTLDLESVSPELLLCRDLELAVPGTYRADAPVVTISSFS 2039
Query: 238 PQLVVITSKQRPRKLTIHGSDGEDYAFLLKGHEDLRQDERVMQLFGLVNTLLENSIETAE 297
QLVVITSKQRPRKLTIHG+DGEDYAFLLKGHEDLRQDERVMQLFGLVNTLLENS +TAE
Sbjct: 2040 RQLVVITSKQRPRKLTIHGNDGEDYAFLLKGHEDLRQDERVMQLFGLVNTLLENSRKTAE 2099
Query: 298 KDLSIQRYAVIPLSPNSGLIGWVPD 322
KDLSIQRY+VIPLSPNSGLIGWVP+
Sbjct: 2100 KDLSIQRYSVIPLSPNSGLIGWVPN 2124
Score = 199 bits (507), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/163 (66%), Positives = 122/163 (74%), Gaps = 11/163 (6%)
Query: 322 DSVMAMMEAFVHDPLINWRLFNFNEVPQ-----TSNFASTHVQPVVSSDESAPNRELAQP 376
DSVMAMMEAFVHDPLINWRLFNFNEVPQ +N + DE + +L QP
Sbjct: 2294 DSVMAMMEAFVHDPLINWRLFNFNEVPQLALLGNNNPNAPADVEPDEEDEDPADIDLPQP 2353
Query: 377 QRGARERELLQAVNQLGDANEVLNERAVVVMARMSNKLTGRDFSTGASSSSVTSSIQYAV 436
QR RE+E+LQAVN LGDANEVLNERAVVVMARMS+KLTGRDFS+ A S+ +
Sbjct: 2354 QRSTREKEILQAVNMLGDANEVLNERAVVVMARMSHKLTGRDFSSSAIPSNPIA------ 2407
Query: 437 DHSALISGDSREVEHGLSVKLQVQKLIIQATSPENLCQNYVGY 479
DH+ L+ GDS EVEHGLSVK+QVQKLI QATS ENLCQNYVG+
Sbjct: 2408 DHNNLLGGDSHEVEHGLSVKVQVQKLINQATSHENLCQNYVGW 2450
>AT1G50030.1 | target of rapamycin | Chr1:18522626-18539619 REVERSE
LENGTH=2481 | 201606
Length = 2481
Score = 572 bits (1474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 276/325 (84%), Positives = 302/325 (92%), Gaps = 4/325 (1%)
Query: 2 ALQKGFAYVNIDTWLVVLPQIIARIHSNNHAVRELIQSLLVRIGRGHPQALMYPLLVACK 61
AL+ GF++VNI+TWLVVLPQIIARIHSNN AVRELIQSLL+RIG HPQALMYPLLVACK
Sbjct: 1827 ALKTGFSHVNINTWLVVLPQIIARIHSNNRAVRELIQSLLIRIGENHPQALMYPLLVACK 1886
Query: 62 SISNLRKAAAQEVVERVRQHSGVLVDQAQLVSKELIRVAILWHEMWHEALEEASRLYFGE 121
SISNLR+AAAQEVV++VRQHSG LVDQAQLVS ELIRVAILWHEMWHEALEEASRLYFGE
Sbjct: 1887 SISNLRRAAAQEVVDKVRQHSGALVDQAQLVSHELIRVAILWHEMWHEALEEASRLYFGE 1946
Query: 122 HNIEGMLKVLEPLHEMLEEG----AHTLKEQTFIQAYGRELLEAYECCMKYKKTGKDAEL 177
HNIEGMLKVLEPLH+ML+EG + T++E+ FI+AY EL EA+ECC YK TGKDAEL
Sbjct: 1947 HNIEGMLKVLEPLHDMLDEGVKKDSTTIQERAFIEAYRHELKEAHECCCNYKITGKDAEL 2006
Query: 178 TQAWDLYYHVFRRIDKQLPSLTTLDLQSVSPELLNCRNLELAVPGTYRAGSPVVTIASFA 237
TQAWDLYYHVF+RIDKQL SLTTLDL+SVSPELL CR+LELAVPGTYRA +PVVTI+SF+
Sbjct: 2007 TQAWDLYYHVFKRIDKQLASLTTLDLESVSPELLLCRDLELAVPGTYRADAPVVTISSFS 2066
Query: 238 PQLVVITSKQRPRKLTIHGSDGEDYAFLLKGHEDLRQDERVMQLFGLVNTLLENSIETAE 297
QLVVITSKQRPRKLTIHG+DGEDYAFLLKGHEDLRQDERVMQLFGLVNTLLENS +TAE
Sbjct: 2067 RQLVVITSKQRPRKLTIHGNDGEDYAFLLKGHEDLRQDERVMQLFGLVNTLLENSRKTAE 2126
Query: 298 KDLSIQRYAVIPLSPNSGLIGWVPD 322
KDLSIQRY+VIPLSPNSGLIGWVP+
Sbjct: 2127 KDLSIQRYSVIPLSPNSGLIGWVPN 2151
Score = 199 bits (507), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/163 (66%), Positives = 122/163 (74%), Gaps = 11/163 (6%)
Query: 322 DSVMAMMEAFVHDPLINWRLFNFNEVPQ-----TSNFASTHVQPVVSSDESAPNRELAQP 376
DSVMAMMEAFVHDPLINWRLFNFNEVPQ +N + DE + +L QP
Sbjct: 2321 DSVMAMMEAFVHDPLINWRLFNFNEVPQLALLGNNNPNAPADVEPDEEDEDPADIDLPQP 2380
Query: 377 QRGARERELLQAVNQLGDANEVLNERAVVVMARMSNKLTGRDFSTGASSSSVTSSIQYAV 436
QR RE+E+LQAVN LGDANEVLNERAVVVMARMS+KLTGRDFS+ A S+ +
Sbjct: 2381 QRSTREKEILQAVNMLGDANEVLNERAVVVMARMSHKLTGRDFSSSAIPSNPIA------ 2434
Query: 437 DHSALISGDSREVEHGLSVKLQVQKLIIQATSPENLCQNYVGY 479
DH+ L+ GDS EVEHGLSVK+QVQKLI QATS ENLCQNYVG+
Sbjct: 2435 DHNNLLGGDSHEVEHGLSVKVQVQKLINQATSHENLCQNYVGW 2477
>AT5G40820.2 | Ataxia telangiectasia-mutated and RAD3-like protein |
Chr5:16343860-16353847 REVERSE LENGTH=2703 | 201606
Length = 2703
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 64/98 (65%)
Query: 226 AGSPVVTIASFAPQLVVITSKQRPRKLTIHGSDGEDYAFLLKGHEDLRQDERVMQLFGLV 285
+GS + TI+ A + +++S QRP+K+ + G+DG +Y FL K +DLR+D R+M+ ++
Sbjct: 2357 SGSDLPTISGIADEAEILSSLQRPKKIILLGNDGIEYPFLCKPKDDLRKDARMMEFTAMI 2416
Query: 286 NTLLENSIETAEKDLSIQRYAVIPLSPNSGLIGWVPDS 323
N LL E+ + L I+ +AV PL+ + GL+ WVP +
Sbjct: 2417 NRLLSKYPESRRRKLYIRTFAVAPLTEDCGLVEWVPHT 2454
>AT5G40820.4 | Ataxia telangiectasia-mutated and RAD3-like protein |
Chr5:16343860-16353847 REVERSE LENGTH=2702 | 201606
Length = 2702
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 64/98 (65%)
Query: 226 AGSPVVTIASFAPQLVVITSKQRPRKLTIHGSDGEDYAFLLKGHEDLRQDERVMQLFGLV 285
+GS + TI+ A + +++S QRP+K+ + G+DG +Y FL K +DLR+D R+M+ ++
Sbjct: 2356 SGSDLPTISGIADEAEILSSLQRPKKIILLGNDGIEYPFLCKPKDDLRKDARMMEFTAMI 2415
Query: 286 NTLLENSIETAEKDLSIQRYAVIPLSPNSGLIGWVPDS 323
N LL E+ + L I+ +AV PL+ + GL+ WVP +
Sbjct: 2416 NRLLSKYPESRRRKLYIRTFAVAPLTEDCGLVEWVPHT 2453
>AT5G40820.3 | Ataxia telangiectasia-mutated and RAD3-like protein |
Chr5:16343860-16353847 REVERSE LENGTH=2702 | 201606
Length = 2702
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 64/98 (65%)
Query: 226 AGSPVVTIASFAPQLVVITSKQRPRKLTIHGSDGEDYAFLLKGHEDLRQDERVMQLFGLV 285
+GS + TI+ A + +++S QRP+K+ + G+DG +Y FL K +DLR+D R+M+ ++
Sbjct: 2356 SGSDLPTISGIADEAEILSSLQRPKKIILLGNDGIEYPFLCKPKDDLRKDARMMEFTAMI 2415
Query: 286 NTLLENSIETAEKDLSIQRYAVIPLSPNSGLIGWVPDS 323
N LL E+ + L I+ +AV PL+ + GL+ WVP +
Sbjct: 2416 NRLLSKYPESRRRKLYIRTFAVAPLTEDCGLVEWVPHT 2453