BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g1490.1
(176 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 109 6e-28
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 109 bits (272), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 95/187 (50%), Gaps = 32/187 (17%)
Query: 3 RQKARVQWLNEMDSNTKFFHNTIKERRATNNIYCLTRPNGEILNEQQDIVDECVGHYKAF 62
RQK+R++WL + D+NT+FFH I +A N I L R + ++ E V E + Y
Sbjct: 436 RQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFL-RMDDDVRVENVTQVKEMIVAYYTH 494
Query: 63 L-----------ALMRL--------------------WQGEVVFALSTIGSDKAPGPDGF 91
L ++ R+ E+ A+ + +KAPGPD F
Sbjct: 495 LLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSF 554
Query: 92 SSYFFKRCWSIIGDDFTRAVLSFFKSGKLLGEVNATLLTLIPKVSNVNSMGDFRPIACCN 151
++ FF W ++ D AV FF++G LL NAT +TLIPKV+ V+ + FRP++CC
Sbjct: 555 TAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCT 614
Query: 152 VVYKTIT 158
VVYK IT
Sbjct: 615 VVYKIIT 621