BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g1590.1
(169 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 167 3e-48
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 167 3e-48
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 88 4e-22
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 167 bits (423), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 116/170 (68%), Gaps = 4/170 (2%)
Query: 1 MKEELPALYENKTWELVNLPHRKKTVGCRWVYKTKYKSDGSIERHKARFVAKGFTETYGE 60
M +E+ A+ TWE+ LP KK +GC+WVYK KY SDG+IER+KAR VAKG+T+ G
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161
Query: 61 DYKETFAPVAKMNTFRVLMSLAVNKDWKLFQIDVKNAFLHGNLEKEVYMSIPPGHPQESN 120
D+ ETF+PV K+ + +++++++ ++ L Q+D+ NAFL+G+L++E+YM +PPG+
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221
Query: 121 INL----VCKLKKAIYELKQSPSAWYSKLSSVLMKDGLKRSSADPSLFIK 166
+L VC LKK+IY LKQ+ W+ K S L+ G +S +D + F+K
Sbjct: 222 DSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLK 271
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 167 bits (423), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 116/170 (68%), Gaps = 4/170 (2%)
Query: 1 MKEELPALYENKTWELVNLPHRKKTVGCRWVYKTKYKSDGSIERHKARFVAKGFTETYGE 60
M +E+ A+ TWE+ LP KK +GC+WVYK KY SDG+IER+KAR VAKG+T+ G
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161
Query: 61 DYKETFAPVAKMNTFRVLMSLAVNKDWKLFQIDVKNAFLHGNLEKEVYMSIPPGHPQESN 120
D+ ETF+PV K+ + +++++++ ++ L Q+D+ NAFL+G+L++E+YM +PPG+
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221
Query: 121 INL----VCKLKKAIYELKQSPSAWYSKLSSVLMKDGLKRSSADPSLFIK 166
+L VC LKK+IY LKQ+ W+ K S L+ G +S +D + F+K
Sbjct: 222 DSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLK 271
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 87.8 bits (216), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 57/82 (69%)
Query: 1 MKEELPALYENKTWELVNLPHRKKTVGCRWVYKTKYKSDGSIERHKARFVAKGFTETYGE 60
M+EEL AL NKTW LV P + +GC+WV+KTK SDG+++R KAR VAKGF + G
Sbjct: 44 MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGI 103
Query: 61 DYKETFAPVAKMNTFRVLMSLA 82
+ ET++PV + T R ++++A
Sbjct: 104 YFVETYSPVVRTATIRTILNVA 125