BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g1600.1
(218 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 154 6e-43
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 154 6e-43
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 93 6e-23
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 51 2e-08
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 154 bits (389), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 111/169 (65%), Gaps = 6/169 (3%)
Query: 7 ILQYLKGSLGRGLLMRKNDDISGHSISAYSDADWAGCLVDRKSTTGYCTFVGGNMVTWKS 66
IL Y+KG++G+GL ++ + +SDA + C R+ST GYC F+G ++++WKS
Sbjct: 420 ILHYIKGTVGQGLFYSSQAEMQ---LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKS 476
Query: 67 KKQNVVAQSSAEAKYRAMASTTFEIIWLGALLEKLGFASSQPTKMFCNNQAAMHIASNPV 126
KKQ VV++SSAEA+YRA++ T E++WL +L S+PT +FC+N AA+HIA+N V
Sbjct: 477 KKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAV 536
Query: 127 FHERTKHIELDCHFVRD-NIKANNICTPFVCTDQQLADIFTKGLPAIKR 174
FHERTKHIE DCH VR+ ++ + F D+Q D FT+ L I R
Sbjct: 537 FHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLSPILR 583
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 154 bits (389), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 111/169 (65%), Gaps = 6/169 (3%)
Query: 7 ILQYLKGSLGRGLLMRKNDDISGHSISAYSDADWAGCLVDRKSTTGYCTFVGGNMVTWKS 66
IL Y+KG++G+GL ++ + +SDA + C R+ST GYC F+G ++++WKS
Sbjct: 420 ILHYIKGTVGQGLFYSSQAEMQ---LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKS 476
Query: 67 KKQNVVAQSSAEAKYRAMASTTFEIIWLGALLEKLGFASSQPTKMFCNNQAAMHIASNPV 126
KKQ VV++SSAEA+YRA++ T E++WL +L S+PT +FC+N AA+HIA+N V
Sbjct: 477 KKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAV 536
Query: 127 FHERTKHIELDCHFVRD-NIKANNICTPFVCTDQQLADIFTKGLPAIKR 174
FHERTKHIE DCH VR+ ++ + F D+Q D FT+ L I R
Sbjct: 537 FHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLSPILR 583
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 93.2 bits (230), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 64/90 (71%), Gaps = 3/90 (3%)
Query: 7 ILQYLKGSLGRGLLMRKNDDISGHSISAYSDADWAGCLVDRKSTTGYCTFVGGNMVTWKS 66
+L+Y+KG++ GL + KN ++ + A+ D+DWAGC R+STTG+CTF+G N+++W +
Sbjct: 142 VLRYVKGTIFHGLYIHKNSKLN---VQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSA 198
Query: 67 KKQNVVAQSSAEAKYRAMASTTFEIIWLGA 96
K+Q V++SS E +YRA+A T E+ W A
Sbjct: 199 KRQPTVSRSSTETEYRALALTAAELTWSSA 228
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 51.2 bits (121), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 1 MNAPTGILQYLKGSLGRGLLMRKNDDISGHSISAYSDADWAGCLVDRKSTTGYCTFV 57
M A +L Y+KG++G+GL D+ + A++D+DWA C R+S TG+C+ V
Sbjct: 29 MQAVYKVLHYVKGTVGQGLFYSATSDLQ---LKAFADSDWASCPDTRRSVTGFCSLV 82