BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g1610.1
(146 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATCG00810.1 | ribosomal protein L22 | ChrC:83467-83949 REVERSE L... 130 2e-39
AT4G28360.1 | Ribosomal protein L22p/L17e family protein | Chr4:... 57 4e-10
AT1G52370.4 | Ribosomal protein L22p/L17e family protein | Chr1:... 50 6e-08
AT1G52370.3 | Ribosomal protein L22p/L17e family protein | Chr1:... 50 6e-08
AT1G52370.2 | Ribosomal protein L22p/L17e family protein | Chr1:... 50 6e-08
>ATCG00810.1 | ribosomal protein L22 | ChrC:83467-83949 REVERSE
LENGTH=160 | 201606
Length = 160
Score = 130 bits (327), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 73/89 (82%), Gaps = 3/89 (3%)
Query: 1 MPYRACYPIFKLVYSAAANACHNMGFNETYLIISQAEVNEGTIVKKLKPRARERSYPIKR 60
MPYR CYPIFKLVYSAAANA HN GF ET L+IS+AEVN+G VKKLKPRAR RSYPIKR
Sbjct: 49 MPYRGCYPIFKLVYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKR 108
Query: 61 PTCHITIVLKDIS---KDQECYIWLRKYG 86
TCHITIVL+DIS + +E ++L+K G
Sbjct: 109 STCHITIVLEDISFYQQYEEYLMYLKKPG 137
>AT4G28360.1 | Ribosomal protein L22p/L17e family protein |
Chr4:14029294-14030926 REVERSE LENGTH=271 | 201606
Length = 271
Score = 56.6 bits (135), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 4 RACYPIFKLVYSAAANACHNMGFNETYLIISQAEVNEGTIVKKLKPRARERSYPIKRPTC 63
RA +++++++A ANA HN G + L++++A V +G KK+ A+ RS I P C
Sbjct: 146 RAAQTVYRVIHAARANATHNHGLDPDRLLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRC 205
Query: 64 HITIVLKDISKDQECYIWLRKYGWVYIDKYTDVRERYLC 102
+T+++++ + ++E I K V+ K RER L
Sbjct: 206 RLTVIVRETTPEEEAEIARLK---VHNFKKKSKRERQLV 241
>AT1G52370.4 | Ribosomal protein L22p/L17e family protein |
Chr1:19507052-19508699 FORWARD LENGTH=269 | 201606
Length = 269
Score = 50.4 bits (119), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 42/67 (62%)
Query: 4 RACYPIFKLVYSAAANACHNMGFNETYLIISQAEVNEGTIVKKLKPRARERSYPIKRPTC 63
RA +++++++A ANA HN G + L++++A V +G KK+ A+ RS I P C
Sbjct: 145 RASQTVYRVIHAARANATHNHGLDPDRLLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRC 204
Query: 64 HITIVLK 70
+T++++
Sbjct: 205 RLTVIVR 211
>AT1G52370.3 | Ribosomal protein L22p/L17e family protein |
Chr1:19507052-19508699 FORWARD LENGTH=269 | 201606
Length = 269
Score = 50.4 bits (119), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 42/67 (62%)
Query: 4 RACYPIFKLVYSAAANACHNMGFNETYLIISQAEVNEGTIVKKLKPRARERSYPIKRPTC 63
RA +++++++A ANA HN G + L++++A V +G KK+ A+ RS I P C
Sbjct: 145 RASQTVYRVIHAARANATHNHGLDPDRLLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRC 204
Query: 64 HITIVLK 70
+T++++
Sbjct: 205 RLTVIVR 211
>AT1G52370.2 | Ribosomal protein L22p/L17e family protein |
Chr1:19507052-19508699 FORWARD LENGTH=269 | 201606
Length = 269
Score = 50.4 bits (119), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 42/67 (62%)
Query: 4 RACYPIFKLVYSAAANACHNMGFNETYLIISQAEVNEGTIVKKLKPRARERSYPIKRPTC 63
RA +++++++A ANA HN G + L++++A V +G KK+ A+ RS I P C
Sbjct: 145 RASQTVYRVIHAARANATHNHGLDPDRLLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRC 204
Query: 64 HITIVLK 70
+T++++
Sbjct: 205 RLTVIVR 211