BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g1660.1
(489 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G51172.1 | hypothetical protein | Chr1:18963205-18965571 FORW... 59 8e-09
AT4G03830.1 | hypothetical protein (Protein of unknown function%... 52 7e-07
>AT1G51172.1 | hypothetical protein | Chr1:18963205-18965571 FORWARD
LENGTH=681 | 201606
Length = 681
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 9 LRDTYAIPATVELLLPSPQDKINLTDDRRVGVYEVFFN-LGLVVPFSLFLVDLLNHYGVQ 67
LR + IP ++L+ P + +E+FF+ GL P L+DL++ +G+
Sbjct: 33 LRGAHQIPHQIKLISPGTKTSPESPPPGHTCAFEIFFSECGLFFPLPDILIDLMHEFGIA 92
Query: 68 LFQLSPNAVMTIMAFYFLCLHHGEKASLYAFDKIFSVKSSDRCWHYFSS 116
L QL PN + T++ L G + +L F ++++VK S +F S
Sbjct: 93 LPQLCPNVIRTVLCLLTLAEEDGFRLALSDFLQLYAVKKSRTNNTFFLS 141
>AT4G03830.1 | hypothetical protein (Protein of unknown function%2C
DUF601) | Chr4:1790440-1792458 FORWARD LENGTH=578 |
201606
Length = 578
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 2 TQEEIDALRDTYAIPATVELLLPSPQDKINLTDDRRVGVYEVFFN-LGLVVPFSLFLVDL 60
T + L+ + IP + L+ P D +E+FF+ GL P L+D
Sbjct: 26 TSRRLSLLKGAHGIPGRINLISPEATDSPETPSPGHACAFEIFFSECGLYFPLPDILIDF 85
Query: 61 LNHYGVQLFQLSPNAVMTIMAFYFLC 86
++ +G+ L QL PN + TI++ L
Sbjct: 86 MHEFGIALPQLCPNVIRTILSLLTLA 111